RNA–Protein interactions for RNA: ENST00000532542.1

TRIM3-211, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 4,419 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-211ENST00000532542 NTN5Q8WTR8 489 aaPredicted RBP7.77□□□□□ -1.16
TRIM3-211ENST00000532542 ASH1LQ9NR48 2969 aaKnown RBP7.77□□□□□ -1.17
TRIM3-211ENST00000532542 PRB2P02812 416 aaPredicted RBP7.77□□□□□ -1.17
TRIM3-211ENST00000532542 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
TRIM3-211ENST00000532542 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
TRIM3-211ENST00000532542 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
TRIM3-211ENST00000532542 G3V4G9 280 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 TRIAP1O43715 76 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 LINC00612Q8N6U2 182 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 BSNQ9UPA5 3926 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 H3BT86 120 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
TRIM3-211ENST00000532542 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
TRIM3-211ENST00000532542 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
TRIM3-211ENST00000532542 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
TRIM3-211ENST00000532542 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
TRIM3-211ENST00000532542 BAALC-AS2P0C853 105 aa7.74□□□□□ -1.17
TRIM3-211ENST00000532542 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
TRIM3-211ENST00000532542 MAST4O15021 2626 aa7.74□□□□□ -1.17
TRIM3-211ENST00000532542 COX17Q14061 63 aa7.74□□□□□ -1.17
TRIM3-211ENST00000532542 SMG1Q96Q15 3661 aaKnown RBP7.73□□□□□ -1.17
TRIM3-211ENST00000532542 FOXI1Q12951 378 aa7.73□□□□□ -1.17
TRIM3-211ENST00000532542 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
TRIM3-211ENST00000532542 H3BNG1 76 aa7.72□□□□□ -1.17
TRIM3-211ENST00000532542 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
TRIM3-211ENST00000532542 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
TRIM3-211ENST00000532542 GAGE2EQ4V326 116 aa7.71□□□□□ -1.17
TRIM3-211ENST00000532542 TTC32Q5I0X7 151 aa7.71□□□□□ -1.17
TRIM3-211ENST00000532542 GAGE2DQ9UEU5 116 aa7.71□□□□□ -1.17
TRIM3-211ENST00000532542 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.17
TRIM3-211ENST00000532542 KLK5Q9Y337 293 aaPredicted RBP7.71□□□□□ -1.18
TRIM3-211ENST00000532542 NCR3O14931 201 aa7.71□□□□□ -1.18
TRIM3-211ENST00000532542 ORMDL1Q9P0S3 153 aa7.71□□□□□ -1.18
TRIM3-211ENST00000532542 FBN2P35556 2912 aa7.71□□□□□ -1.18
TRIM3-211ENST00000532542 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
TRIM3-211ENST00000532542 SPATA3Q8NHX4 192 aa7.7□□□□□ -1.18
TRIM3-211ENST00000532542 WIPF1O43516 503 aa7.7□□□□□ -1.18
TRIM3-211ENST00000532542 TRACP01848 142 aa7.69□□□□□ -1.18
TRIM3-211ENST00000532542 RPL18AQ02543 176 aaKnown RBP7.69□□□□□ -1.18
TRIM3-211ENST00000532542 LST1O00453 97 aa7.69□□□□□ -1.18
TRIM3-211ENST00000532542 LECT2O14960 151 aa7.69□□□□□ -1.18
TRIM3-211ENST00000532542 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
TRIM3-211ENST00000532542 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
TRIM3-211ENST00000532542 KRTAP10-11P60412 298 aa7.68□□□□□ -1.18
TRIM3-211ENST00000532542 WFDC10BQ8IUB3 73 aa7.68□□□□□ -1.18
TRIM3-211ENST00000532542 LINC00526Q96FQ7 95 aa7.68□□□□□ -1.18
TRIM3-211ENST00000532542 EGFEM1PQ0D2K5 195 aa7.67□□□□□ -1.18
TRIM3-211ENST00000532542 GAGE2BQ13066 116 aa7.67□□□□□ -1.18
TRIM3-211ENST00000532542 MXRA5Q9NR99 2828 aa7.67□□□□□ -1.18
TRIM3-211ENST00000532542 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
TRIM3-211ENST00000532542 A0A1B0GV72 72 aa7.67□□□□□ -1.18
TRIM3-211ENST00000532542 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
TRIM3-211ENST00000532542 SYCNQ0VAF6 134 aa7.66□□□□□ -1.18
TRIM3-211ENST00000532542 LITAFQ99732 161 aa7.66□□□□□ -1.18
TRIM3-211ENST00000532542 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
TRIM3-211ENST00000532542 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.18
TRIM3-211ENST00000532542 ACYP1P07311 99 aa7.65□□□□□ -1.18
TRIM3-211ENST00000532542 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
TRIM3-211ENST00000532542 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.19
TRIM3-211ENST00000532542 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.19
TRIM3-211ENST00000532542 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.19
TRIM3-211ENST00000532542 HIVEP1P15822 2718 aa7.65□□□□□ -1.19
TRIM3-211ENST00000532542 RPL28P46779 137 aaKnown RBP7.64□□□□□ -1.19
TRIM3-211ENST00000532542 H3BQ85 93 aa7.64□□□□□ -1.19
TRIM3-211ENST00000532542 ESRGQ1W209 222 aa7.63□□□□□ -1.19
TRIM3-211ENST00000532542 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
TRIM3-211ENST00000532542 NF1P21359 2839 aa7.63□□□□□ -1.19
TRIM3-211ENST00000532542 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
TRIM3-211ENST00000532542 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
TRIM3-211ENST00000532542 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
TRIM3-211ENST00000532542 NDUFC2O95298 119 aa7.62□□□□□ -1.19
TRIM3-211ENST00000532542 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
TRIM3-211ENST00000532542 TMEM256-PLSCR3K7ERE1 68 aa7.62□□□□□ -1.19
TRIM3-211ENST00000532542 JMJD7-PLA2G4BH0Y9G9 81 aa7.61□□□□□ -1.19
TRIM3-211ENST00000532542 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
TRIM3-211ENST00000532542 Q8N3U1 123 aa7.61□□□□□ -1.19
TRIM3-211ENST00000532542 F8WDY8 70 aa7.61□□□□□ -1.19
TRIM3-211ENST00000532542 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
TRIM3-211ENST00000532542 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 COL6A5A8TX70 2615 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 TENM4Q6N022 2769 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 COX7BP24311 80 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
TRIM3-211ENST00000532542 hADV29S1A0JD25 119 aa7.59□□□□□ -1.19
TRIM3-211ENST00000532542 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
TRIM3-211ENST00000532542 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
TRIM3-211ENST00000532542 A0A1B0GX51 115 aa7.59□□□□□ -1.19
TRIM3-211ENST00000532542 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
TRIM3-211ENST00000532542 M0QXV9 152 aa7.58□□□□□ -1.2
TRIM3-211ENST00000532542 M0R378 163 aa7.58□□□□□ -1.2
TRIM3-211ENST00000532542 TRAV23DV6A0A075B6W5 121 aa7.58□□□□□ -1.2
TRIM3-211ENST00000532542 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
TRIM3-211ENST00000532542 F8WEM9 126 aa7.57□□□□□ -1.2
TRIM3-211ENST00000532542 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
TRIM3-211ENST00000532542 K7EIL1 84 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms