RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 Q6ZRU5 148 aa11.89□□□□□ -0.51
PUF60-218ENST00000531995 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
PUF60-218ENST00000531995 PANO1I0J062 215 aa11.88□□□□□ -0.51
PUF60-218ENST00000531995 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
PUF60-218ENST00000531995 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
PUF60-218ENST00000531995 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
PUF60-218ENST00000531995 ZNF22P17026 224 aaPredicted RBP11.87□□□□□ -0.51
PUF60-218ENST00000531995 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
PUF60-218ENST00000531995 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
PUF60-218ENST00000531995 CARD19Q96LW7 228 aa11.86□□□□□ -0.51
PUF60-218ENST00000531995 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
PUF60-218ENST00000531995 UNQ6190/PRO20217Q6UXQ8 127 aa11.85□□□□□ -0.51
PUF60-218ENST00000531995 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
PUF60-218ENST00000531995 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
PUF60-218ENST00000531995 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.85□□□□□ -0.51
PUF60-218ENST00000531995 F8WDY8 70 aa11.84□□□□□ -0.51
PUF60-218ENST00000531995 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
PUF60-218ENST00000531995 ODF1Q14990 250 aa11.84□□□□□ -0.51
PUF60-218ENST00000531995 UBR4Q5T4S7 5183 aa11.84□□□□□ -0.51
PUF60-218ENST00000531995 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
PUF60-218ENST00000531995 F8VRH5 84 aa11.82□□□□□ -0.52
PUF60-218ENST00000531995 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
PUF60-218ENST00000531995 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
PUF60-218ENST00000531995 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
PUF60-218ENST00000531995 Q8IZM0 81 aa11.82□□□□□ -0.52
PUF60-218ENST00000531995 PACRGQ96M98 296 aaPredicted RBP11.82□□□□□ -0.52
PUF60-218ENST00000531995 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
PUF60-218ENST00000531995 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
PUF60-218ENST00000531995 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
PUF60-218ENST00000531995 H0Y8G0 127 aa11.8□□□□□ -0.52
PUF60-218ENST00000531995 NDUFA1O15239 70 aa11.8□□□□□ -0.52
PUF60-218ENST00000531995 A0A096LNI7 61 aa11.79□□□□□ -0.52
PUF60-218ENST00000531995 H3BRM9 83 aa11.79□□□□□ -0.52
PUF60-218ENST00000531995 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
PUF60-218ENST00000531995 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
PUF60-218ENST00000531995 PRSS2P07478 247 aa11.78□□□□□ -0.52
PUF60-218ENST00000531995 HNRNPA3P51991 378 aaKnown RBP11.78□□□□□ -0.52
PUF60-218ENST00000531995 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
PUF60-218ENST00000531995 SPACA4Q8TDM5 124 aa11.78□□□□□ -0.52
PUF60-218ENST00000531995 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
PUF60-218ENST00000531995 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
PUF60-218ENST00000531995 TMEM223A0PJW6 202 aa11.77□□□□□ -0.53
PUF60-218ENST00000531995 PMCHL2Q9BQD1 86 aa11.77□□□□□ -0.53
PUF60-218ENST00000531995 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
PUF60-218ENST00000531995 OXTP01178 125 aa11.76□□□□□ -0.53
PUF60-218ENST00000531995 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
PUF60-218ENST00000531995 LOC107984640A0A0U1RRK4 108 aa11.75□□□□□ -0.53
PUF60-218ENST00000531995 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
PUF60-218ENST00000531995 CKS1BP61024 79 aa11.75□□□□□ -0.53
PUF60-218ENST00000531995 SERTAD4-AS1Q5TG53 156 aa11.75□□□□□ -0.53
PUF60-218ENST00000531995 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
PUF60-218ENST00000531995 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
PUF60-218ENST00000531995 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
PUF60-218ENST00000531995 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
PUF60-218ENST00000531995 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
PUF60-218ENST00000531995 Q6ZRP5 223 aa11.73□□□□□ -0.53
PUF60-218ENST00000531995 A0A087WYN8 130 aa11.72□□□□□ -0.53
PUF60-218ENST00000531995 DPM2O94777 84 aa11.72□□□□□ -0.53
PUF60-218ENST00000531995 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
PUF60-218ENST00000531995 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
PUF60-218ENST00000531995 IGKCP01834 107 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 PLNP26678 52 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 CXCL5P42830 114 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 MAJINQ3KP22 176 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 LINC01545Q5VT33 79 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 PET117Q6UWS5 81 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
PUF60-218ENST00000531995 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
PUF60-218ENST00000531995 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
PUF60-218ENST00000531995 PKIGQ9Y2B9 76 aa11.69□□□□□ -0.54
PUF60-218ENST00000531995 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 NDUFC2-KCTD14E9PQ53 114 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 KRTDAPP60985 99 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
PUF60-218ENST00000531995 STPG4Q8N801 248 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 ZNF625Q96I27 306 aaPredicted RBP11.68□□□□□ -0.54
PUF60-218ENST00000531995 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
PUF60-218ENST00000531995 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
PUF60-218ENST00000531995 S100A6P06703 90 aa11.66□□□□□ -0.54
PUF60-218ENST00000531995 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
PUF60-218ENST00000531995 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
PUF60-218ENST00000531995 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
PUF60-218ENST00000531995 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
PUF60-218ENST00000531995 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
PUF60-218ENST00000531995 LEPROTO15243 131 aa11.64□□□□□ -0.55
PUF60-218ENST00000531995 FAM168BA1KXE4 195 aa11.63□□□□□ -0.55
PUF60-218ENST00000531995 MT1HL1P0DM35 61 aa11.61□□□□□ -0.55
PUF60-218ENST00000531995 S100A2P29034 98 aa11.61□□□□□ -0.55
PUF60-218ENST00000531995 TNXBP22105 4242 aa11.6□□□□□ -0.55
PUF60-218ENST00000531995 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
PUF60-218ENST00000531995 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
PUF60-218ENST00000531995 E9PLD3 99 aa11.59□□□□□ -0.55
PUF60-218ENST00000531995 J3QQQ9 107 aa11.59□□□□□ -0.55
PUF60-218ENST00000531995 XAGE1AQ9HD64 81 aa11.59□□□□□ -0.55
PUF60-218ENST00000531995 PFN2P35080 140 aa11.58□□□□□ -0.56
PUF60-218ENST00000531995 HERVK_113P61574 105 aa11.58□□□□□ -0.56
PUF60-218ENST00000531995 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
PUF60-218ENST00000531995 NDUFA12Q9UI09 145 aa11.58□□□□□ -0.56
PUF60-218ENST00000531995 IGKV2D-26A0A0A0MRZ7 120 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms