RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
VPS26B-206ENST00000531741 SMIM11BQ8TCY0 68 aa11.63□□□□□ -0.55
VPS26B-206ENST00000531741 H0YGX0 51 aa11.63□□□□□ -0.55
VPS26B-206ENST00000531741 PFN2P35080 140 aa11.63□□□□□ -0.55
VPS26B-206ENST00000531741 SPATA3Q8NHX4 192 aa11.63□□□□□ -0.55
VPS26B-206ENST00000531741 C22orf24Q9Y442 160 aa11.63□□□□□ -0.55
VPS26B-206ENST00000531741 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
VPS26B-206ENST00000531741 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
VPS26B-206ENST00000531741 CD164L2Q6UWJ8 174 aa11.61□□□□□ -0.55
VPS26B-206ENST00000531741 IGHV4-28A0A0C4DH34 117 aa11.59□□□□□ -0.55
VPS26B-206ENST00000531741 CXCL5P42830 114 aa11.59□□□□□ -0.55
VPS26B-206ENST00000531741 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
VPS26B-206ENST00000531741 MIFP14174 115 aa11.59□□□□□ -0.55
VPS26B-206ENST00000531741 A0A096LPF7 62 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 INAFM2P0DMQ5 153 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 MALP21145 153 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 DAD1P61803 113 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 COX17Q14061 63 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.56
VPS26B-206ENST00000531741 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 Q8NAQ8 132 aa11.58□□□□□ -0.56
VPS26B-206ENST00000531741 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
VPS26B-206ENST00000531741 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
VPS26B-206ENST00000531741 ATP5G1P05496 136 aa11.57□□□□□ -0.56
VPS26B-206ENST00000531741 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
VPS26B-206ENST00000531741 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
VPS26B-206ENST00000531741 TTC32Q5I0X7 151 aa11.56□□□□□ -0.56
VPS26B-206ENST00000531741 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
VPS26B-206ENST00000531741 DNAL4O96015 105 aa11.56□□□□□ -0.56
VPS26B-206ENST00000531741 CHCHD10Q8WYQ3 142 aaPredicted RBP11.56□□□□□ -0.56
VPS26B-206ENST00000531741 C11orf68Q9H3H3 251 aaKnown RBP11.56□□□□□ -0.56
VPS26B-206ENST00000531741 Q9HAA7 133 aa11.56□□□□□ -0.56
VPS26B-206ENST00000531741 A0A087WYN8 130 aa11.55□□□□□ -0.56
VPS26B-206ENST00000531741 REG3AQ06141 175 aa11.55□□□□□ -0.56
VPS26B-206ENST00000531741 DEFB4AO15263 64 aa11.55□□□□□ -0.56
VPS26B-206ENST00000531741 WIPF1O43516 503 aa11.55□□□□□ -0.56
VPS26B-206ENST00000531741 NDUFC2O95298 119 aa11.55□□□□□ -0.56
VPS26B-206ENST00000531741 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
VPS26B-206ENST00000531741 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
VPS26B-206ENST00000531741 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 WFDC9Q8NEX5 89 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
VPS26B-206ENST00000531741 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
VPS26B-206ENST00000531741 LELP1Q5T871 98 aa11.51□□□□□ -0.57
VPS26B-206ENST00000531741 LINC00643Q86TS7 51 aa11.51□□□□□ -0.57
VPS26B-206ENST00000531741 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
VPS26B-206ENST00000531741 A0A1B0GX51 115 aa11.5□□□□□ -0.57
VPS26B-206ENST00000531741 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
VPS26B-206ENST00000531741 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
VPS26B-206ENST00000531741 LECT2O14960 151 aa11.49□□□□□ -0.57
VPS26B-206ENST00000531741 Q8N3U1 123 aa11.49□□□□□ -0.57
VPS26B-206ENST00000531741 SMCR5Q8TEV8 140 aa11.49□□□□□ -0.57
VPS26B-206ENST00000531741 IGLV10-54A0A075B6I4 117 aa11.48□□□□□ -0.57
VPS26B-206ENST00000531741 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
VPS26B-206ENST00000531741 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
VPS26B-206ENST00000531741 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
VPS26B-206ENST00000531741 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
VPS26B-206ENST00000531741 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
VPS26B-206ENST00000531741 VWFP04275 2813 aa11.46□□□□□ -0.57
VPS26B-206ENST00000531741 GAGE2AQ6NT46 116 aa11.45□□□□□ -0.58
VPS26B-206ENST00000531741 ORMDL1Q9P0S3 153 aa11.45□□□□□ -0.58
VPS26B-206ENST00000531741 NSD1Q96L73 2696 aaPredicted RBP11.44□□□□□ -0.58
VPS26B-206ENST00000531741 NBEAL2Q6ZNJ1 2754 aa11.44□□□□□ -0.58
VPS26B-206ENST00000531741 OTOGQ6ZRI0 2925 aa11.44□□□□□ -0.58
VPS26B-206ENST00000531741 NOTCH2Q04721 2471 aa11.44□□□□□ -0.58
VPS26B-206ENST00000531741 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
VPS26B-206ENST00000531741 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
VPS26B-206ENST00000531741 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
VPS26B-206ENST00000531741 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
VPS26B-206ENST00000531741 HTN3P15516 51 aa11.42□□□□□ -0.58
VPS26B-206ENST00000531741 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
VPS26B-206ENST00000531741 Q8N814 137 aa11.41□□□□□ -0.58
VPS26B-206ENST00000531741 C14orf132Q9NPU4 83 aa11.41□□□□□ -0.58
VPS26B-206ENST00000531741 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.58
VPS26B-206ENST00000531741 H3BNG1 76 aa11.4□□□□□ -0.58
VPS26B-206ENST00000531741 SLPIP03973 132 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 KLK12Q9UKR0 248 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 C10orf25Q5T742 122 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
VPS26B-206ENST00000531741 CYSRT1A8MQ03 144 aa11.38□□□□□ -0.59
VPS26B-206ENST00000531741 Q8NDZ9 215 aa11.38□□□□□ -0.59
VPS26B-206ENST00000531741 HECTD1Q9ULT8 2610 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 JMJD7-PLA2G4BH0Y9G9 81 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 CCDC179H3BU77 68 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 NCR3O14931 201 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
VPS26B-206ENST00000531741 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
VPS26B-206ENST00000531741 FAM236AA0A1B0GUQ0 79 aa11.36□□□□□ -0.59
VPS26B-206ENST00000531741 FAM236BA0A1B0GV22 79 aa11.36□□□□□ -0.59
VPS26B-206ENST00000531741 S100A7L2Q5SY68 101 aa11.35□□□□□ -0.59
VPS26B-206ENST00000531741 C6orf99Q4VX62 202 aa11.34□□□□□ -0.59
VPS26B-206ENST00000531741 B5MCH6 92 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms