RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
LRRK1-207ENST00000531270 IGLV1-51P01701 117 aa10.43□□□□□ -0.74
LRRK1-207ENST00000531270 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 FREM1Q5H8C1 2179 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 hDV103S1A0JD37 113 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 LYPD5Q6UWN5 251 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 Q6ZRU5 148 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 KIAA1549Q9HCM3 1950 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
LRRK1-207ENST00000531270 SONP18583 2426 aaKnown RBP10.41□□□□□ -0.74
LRRK1-207ENST00000531270 DSCAMO60469 2012 aa10.41□□□□□ -0.74
LRRK1-207ENST00000531270 Q6ZSN1 163 aa10.4□□□□□ -0.74
LRRK1-207ENST00000531270 COL4A3Q01955 1670 aa10.4□□□□□ -0.74
LRRK1-207ENST00000531270 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
LRRK1-207ENST00000531270 SERTAD4-AS1Q5TG53 156 aa10.39□□□□□ -0.75
LRRK1-207ENST00000531270 A0A1B0GU69 56 aa10.39□□□□□ -0.75
LRRK1-207ENST00000531270 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
LRRK1-207ENST00000531270 C2orf16Q68DN1 1984 aa10.38□□□□□ -0.75
LRRK1-207ENST00000531270 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
LRRK1-207ENST00000531270 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
LRRK1-207ENST00000531270 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
LRRK1-207ENST00000531270 MOBPQ13875 183 aa10.36□□□□□ -0.75
LRRK1-207ENST00000531270 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
LRRK1-207ENST00000531270 SMIM29Q86T20 159 aa10.35□□□□□ -0.75
LRRK1-207ENST00000531270 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
LRRK1-207ENST00000531270 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 MDFIQ99750 246 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 SPG11Q96JI7 2443 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 KIAA0087Q14695 138 aa10.33□□□□□ -0.76
LRRK1-207ENST00000531270 HIVEP3Q5T1R4 2406 aa10.32□□□□□ -0.76
LRRK1-207ENST00000531270 LINC00846Q9NV44 126 aa10.32□□□□□ -0.76
LRRK1-207ENST00000531270 Q8N2B8 174 aa10.31□□□□□ -0.76
LRRK1-207ENST00000531270 TECTAO75443 2155 aa10.31□□□□□ -0.76
LRRK1-207ENST00000531270 AMELXQ99217 191 aa10.31□□□□□ -0.76
LRRK1-207ENST00000531270 F8WDY8 70 aa10.3□□□□□ -0.76
LRRK1-207ENST00000531270 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
LRRK1-207ENST00000531270 SPINT4Q6UDR6 99 aa10.29□□□□□ -0.76
LRRK1-207ENST00000531270 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
LRRK1-207ENST00000531270 BDP1A6H8Y1 2624 aa10.29□□□□□ -0.76
LRRK1-207ENST00000531270 FHL3Q13643 280 aa10.29□□□□□ -0.76
LRRK1-207ENST00000531270 ARHGAP32A7KAX9 2087 aa10.29□□□□□ -0.76
LRRK1-207ENST00000531270 A0A1B0GUV1 79 aa10.27□□□□□ -0.76
LRRK1-207ENST00000531270 VPREB1P12018 145 aa10.27□□□□□ -0.77
LRRK1-207ENST00000531270 ACYP2P14621 99 aa10.27□□□□□ -0.77
LRRK1-207ENST00000531270 PLXNB1O43157 2135 aa10.27□□□□□ -0.77
LRRK1-207ENST00000531270 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
LRRK1-207ENST00000531270 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
LRRK1-207ENST00000531270 NHLRC4P0CG21 123 aaPredicted RBP10.26□□□□□ -0.77
LRRK1-207ENST00000531270 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
LRRK1-207ENST00000531270 NUP210LQ5VU65 1888 aa10.25□□□□□ -0.77
LRRK1-207ENST00000531270 ACACBO00763 2458 aa10.24□□□□□ -0.77
LRRK1-207ENST00000531270 CUL9Q8IWT3 2517 aa10.24□□□□□ -0.77
LRRK1-207ENST00000531270 MUC4Q99102 2169 aa10.24□□□□□ -0.77
LRRK1-207ENST00000531270 DOPEY1Q5JWR5 2465 aa10.23□□□□□ -0.77
LRRK1-207ENST00000531270 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
LRRK1-207ENST00000531270 LINC00310P59036 64 aa10.22□□□□□ -0.77
LRRK1-207ENST00000531270 SPATA3Q8NHX4 192 aa10.22□□□□□ -0.77
LRRK1-207ENST00000531270 PHF5AQ7RTV0 110 aaKnown RBP10.22□□□□□ -0.77
LRRK1-207ENST00000531270 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.77
LRRK1-207ENST00000531270 TYMSOSQ8TAI1 123 aa10.21□□□□□ -0.77
LRRK1-207ENST00000531270 EXPH5Q8NEV8 1989 aa10.21□□□□□ -0.78
LRRK1-207ENST00000531270 CXCL6P80162 114 aa10.21□□□□□ -0.78
LRRK1-207ENST00000531270 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
LRRK1-207ENST00000531270 LINC00313P59037 77 aa10.2□□□□□ -0.78
LRRK1-207ENST00000531270 ANKHD1Q8IWZ3 2542 aaKnown RBP10.2□□□□□ -0.78
LRRK1-207ENST00000531270 Q96NJ1 140 aa10.19□□□□□ -0.78
LRRK1-207ENST00000531270 J3QL48 77 aa10.19□□□□□ -0.78
LRRK1-207ENST00000531270 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
LRRK1-207ENST00000531270 A0A1W2PPR1 153 aa10.17□□□□□ -0.78
LRRK1-207ENST00000531270 TP53AIP1Q9HCN2 124 aa10.17□□□□□ -0.78
LRRK1-207ENST00000531270 HCFC1P51610 2035 aa10.17□□□□□ -0.78
LRRK1-207ENST00000531270 RPL37AP61513 92 aaKnown RBP10.17□□□□□ -0.78
LRRK1-207ENST00000531270 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
LRRK1-207ENST00000531270 EP400Q96L91 3159 aa10.17□□□□□ -0.78
LRRK1-207ENST00000531270 RTL8CO15255 209 aa10.16□□□□□ -0.78
LRRK1-207ENST00000531270 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
LRRK1-207ENST00000531270 SSBP3-AS1Q7Z2R9 100 aa10.15□□□□□ -0.78
LRRK1-207ENST00000531270 A0A096LNJ9 63 aa10.14□□□□□ -0.79
LRRK1-207ENST00000531270 CACNA1AO00555 2505 aa10.14□□□□□ -0.79
LRRK1-207ENST00000531270 LINC00315P59091 139 aa10.13□□□□□ -0.79
LRRK1-207ENST00000531270 PCDH15Q96QU1 1955 aa10.12□□□□□ -0.79
LRRK1-207ENST00000531270 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
LRRK1-207ENST00000531270 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
LRRK1-207ENST00000531270 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
LRRK1-207ENST00000531270 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
LRRK1-207ENST00000531270 RAI1Q7Z5J4 1906 aaPredicted RBP10.11□□□□□ -0.79
LRRK1-207ENST00000531270 Q8NBF4 154 aa10.1□□□□□ -0.79
LRRK1-207ENST00000531270 PRO0628Q9UI54 55 aa10.1□□□□□ -0.79
LRRK1-207ENST00000531270 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
LRRK1-207ENST00000531270 ABCA2Q9BZC7 2435 aa10.1□□□□□ -0.79
LRRK1-207ENST00000531270 PCNX3Q9H6A9 2034 aa10.09□□□□□ -0.79
LRRK1-207ENST00000531270 Q6ZRP5 223 aa10.09□□□□□ -0.79
LRRK1-207ENST00000531270 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
LRRK1-207ENST00000531270 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
LRRK1-207ENST00000531270 PRO3102Q9H379 93 aa10.08□□□□□ -0.8
LRRK1-207ENST00000531270 C11orf72Q8NBR9 251 aa10.07□□□□□ -0.8
LRRK1-207ENST00000531270 ATG2AQ2TAZ0 1938 aa10.07□□□□□ -0.8
LRRK1-207ENST00000531270 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms