RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
HIF3A-214ENST00000531043 GAGE10A6NGK3 116 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 S100A8P05109 93 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 C2orf66Q6UXQ4 117 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 Q8IZM0 81 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 LINC00167Q96N53 147 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 TP73-AS1Q9UF72 201 aa7.72□□□□□ -1.17
HIF3A-214ENST00000531043 IGIPA6NJ69 53 aa7.71□□□□□ -1.18
HIF3A-214ENST00000531043 PRSS47A8MTI9 375 aa7.71□□□□□ -1.18
HIF3A-214ENST00000531043 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.18
HIF3A-214ENST00000531043 VCX2Q9H322 139 aa7.71□□□□□ -1.18
HIF3A-214ENST00000531043 CDKN2A-AS1Q9UH64 79 aa7.71□□□□□ -1.18
HIF3A-214ENST00000531043 CYSLTR1Q9Y271 337 aa7.7□□□□□ -1.18
HIF3A-214ENST00000531043 F8VRH5 84 aa7.69□□□□□ -1.18
HIF3A-214ENST00000531043 SCO1O75880 301 aa7.69□□□□□ -1.18
HIF3A-214ENST00000531043 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
HIF3A-214ENST00000531043 Q8N8P6 123 aa7.69□□□□□ -1.18
HIF3A-214ENST00000531043 MAP1LC3AQ9H492 121 aa7.69□□□□□ -1.18
HIF3A-214ENST00000531043 PEA15Q15121 130 aa7.67□□□□□ -1.18
HIF3A-214ENST00000531043 ATP5L2Q7Z4Y8 100 aa7.67□□□□□ -1.18
HIF3A-214ENST00000531043 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
HIF3A-214ENST00000531043 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
HIF3A-214ENST00000531043 IGLV7-46A0A075B6I9 117 aa7.66□□□□□ -1.18
HIF3A-214ENST00000531043 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
HIF3A-214ENST00000531043 UBE2AP49459 152 aa7.65□□□□□ -1.18
HIF3A-214ENST00000531043 HERVK_113P63121 156 aa7.65□□□□□ -1.18
HIF3A-214ENST00000531043 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
HIF3A-214ENST00000531043 LAMTOR2Q9Y2Q5 125 aa7.65□□□□□ -1.18
HIF3A-214ENST00000531043 RAB5BP61020 215 aa7.64□□□□□ -1.19
HIF3A-214ENST00000531043 PNRC1Q12796 327 aaPredicted RBP7.64□□□□□ -1.19
HIF3A-214ENST00000531043 ORMDL2Q53FV1 153 aa7.64□□□□□ -1.19
HIF3A-214ENST00000531043 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
HIF3A-214ENST00000531043 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
HIF3A-214ENST00000531043 NPSP0C0P6 89 aa7.63□□□□□ -1.19
HIF3A-214ENST00000531043 PRLHP81277 87 aa7.63□□□□□ -1.19
HIF3A-214ENST00000531043 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
HIF3A-214ENST00000531043 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
HIF3A-214ENST00000531043 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
HIF3A-214ENST00000531043 ADCYAP1P18509 176 aa7.62□□□□□ -1.19
HIF3A-214ENST00000531043 CXCL5P42830 114 aa7.62□□□□□ -1.19
HIF3A-214ENST00000531043 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
HIF3A-214ENST00000531043 TMEM238C9JI98 176 aa7.61□□□□□ -1.19
HIF3A-214ENST00000531043 SEC11AP67812 179 aa7.61□□□□□ -1.19
HIF3A-214ENST00000531043 C3orf22Q8N5N4 141 aa7.61□□□□□ -1.19
HIF3A-214ENST00000531043 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
HIF3A-214ENST00000531043 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 PDZD11Q5EBL8 140 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 NKAPP1Q8N9T2 125 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
HIF3A-214ENST00000531043 IGLV5-45A0A087WSX0 123 aa7.59□□□□□ -1.19
HIF3A-214ENST00000531043 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
HIF3A-214ENST00000531043 Q8NDZ9 215 aa7.59□□□□□ -1.19
HIF3A-214ENST00000531043 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
HIF3A-214ENST00000531043 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
HIF3A-214ENST00000531043 A0A1B0GVG6 124 aa7.58□□□□□ -1.2
HIF3A-214ENST00000531043 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
HIF3A-214ENST00000531043 K7EMI3 77 aa7.58□□□□□ -1.2
HIF3A-214ENST00000531043 PAPPA-AS1Q5QFB9 102 aa7.58□□□□□ -1.2
HIF3A-214ENST00000531043 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
HIF3A-214ENST00000531043 VPREB1P12018 145 aa7.57□□□□□ -1.2
HIF3A-214ENST00000531043 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
HIF3A-214ENST00000531043 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
HIF3A-214ENST00000531043 M0R378 163 aa7.56□□□□□ -1.2
HIF3A-214ENST00000531043 ERASQ7Z444 233 aa7.56□□□□□ -1.2
HIF3A-214ENST00000531043 TMEM126AQ9H061 195 aa7.56□□□□□ -1.2
HIF3A-214ENST00000531043 CST9LQ9H4G1 147 aa7.56□□□□□ -1.2
HIF3A-214ENST00000531043 PFN2P35080 140 aa7.55□□□□□ -1.2
HIF3A-214ENST00000531043 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
HIF3A-214ENST00000531043 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
HIF3A-214ENST00000531043 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
HIF3A-214ENST00000531043 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
HIF3A-214ENST00000531043 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
HIF3A-214ENST00000531043 G0S2P27469 103 aa7.52□□□□□ -1.21
HIF3A-214ENST00000531043 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
HIF3A-214ENST00000531043 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.21
HIF3A-214ENST00000531043 ATP5LO75964 103 aa7.51□□□□□ -1.21
HIF3A-214ENST00000531043 RAB14P61106 215 aa7.51□□□□□ -1.21
HIF3A-214ENST00000531043 CTAG1AP78358 180 aa7.51□□□□□ -1.21
HIF3A-214ENST00000531043 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
HIF3A-214ENST00000531043 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 PMVKQ15126 192 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 DAND5Q8N907 189 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
HIF3A-214ENST00000531043 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
HIF3A-214ENST00000531043 MRPL18Q9H0U6 180 aaKnown RBP7.49□□□□□ -1.21
HIF3A-214ENST00000531043 ERG28Q9UKR5 140 aa7.49□□□□□ -1.21
HIF3A-214ENST00000531043 ZNF22P17026 224 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-214ENST00000531043 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
HIF3A-214ENST00000531043 FP248Q71RG6 208 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-214ENST00000531043 Q8NBF4 154 aa7.48□□□□□ -1.21
HIF3A-214ENST00000531043 H3BRM9 83 aa7.47□□□□□ -1.21
HIF3A-214ENST00000531043 IGLC3P0DOY3 106 aa7.47□□□□□ -1.21
HIF3A-214ENST00000531043 LINC01547P58512 204 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-214ENST00000531043 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
HIF3A-214ENST00000531043 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
HIF3A-214ENST00000531043 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms