RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 WDR87Q6ZQQ6 2873 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 UNC79Q9P2D8 2635 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 HECTD1Q9ULT8 2610 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 WDFY3Q8IZQ1 3526 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 MYOFQ9NZM1 2061 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 TRAV13-2A0A0B4J235 113 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 A0A0G2JND7 137 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 TRBV6-5A0A0K0K1A5 114 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 HCG22E2RYF7 251 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 C3orf79P0CE67 100 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 KRTDAPP60985 99 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 SNRPFP62306 86 aaKnown RBP1.37□□□□□ -2.19
SVIP-203ENST00000529848 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 SLC48A1Q6P1K1 146 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 CYP2G1PQ6ZSU1 146 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 VMO1Q7Z5L0 202 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 LINC00467Q9BRT7 94 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 PROK2Q9HC23 129 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 HILPDAQ9Y5L2 63 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 FRYLO94915 3013 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 GOLGA4Q13439 2230 aaKnown RBP1.37□□□□□ -2.19
SVIP-203ENST00000529848 AKAP13Q12802 2813 aa1.37□□□□□ -2.19
SVIP-203ENST00000529848 LOC400499M0QZD8 3231 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 ASXL3Q9C0F0 2248 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 C2CD3Q4AC94 2353 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 ZZEF1O43149 2961 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 TRAV22A0A0B4J277 110 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 C10orf142B7Z368 130 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 E7EUB6 86 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 NDUFC1O43677 76 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 COX8AP10176 69 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 MGST1P10620 155 aaKnown RBP1.36□□□□□ -2.19
SVIP-203ENST00000529848 UBE2D3P61077 147 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 UBE2D2P62837 147 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 KLKP1Q107X0 134 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 ITPR1Q14643 2758 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 ZNF56Q15929 161 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 C9orf116Q5BN46 136 aaPredicted RBP1.36□□□□□ -2.19
SVIP-203ENST00000529848 DEFB121Q5J5C9 76 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 Q5VV11 94 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 ZNF826PQ6ZT77 177 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 LINC00643Q86TS7 51 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 SMIM7Q9BQ49 75 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 MANBALQ9NQG1 85 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 MYO9AB2RTY4 2548 aa1.36□□□□□ -2.19
SVIP-203ENST00000529848 USP9XQ93008 2570 aaPredicted RBP1.36□□□□□ -2.19
SVIP-203ENST00000529848 TEP1Q99973 2627 aaKnown RBP1.36□□□□□ -2.19
SVIP-203ENST00000529848 SPTAN1Q13813 2472 aaKnown RBP1.35□□□□□ -2.19
SVIP-203ENST00000529848 DSPP15924 2871 aaKnown RBP1.35□□□□□ -2.19
SVIP-203ENST00000529848 HEATR5BQ9P2D3 2071 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 TRBV7-1A0A0A6YYK4 115 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 FAM223BA6NKX1 122 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 ACYP1P07311 99 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 CASC2Q6XLA1 102 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 Q6ZSA8 131 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 Q8TAT8 98 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 DOPEY1Q5JWR5 2465 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 LAMA5O15230 3695 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 TENM4Q6N022 2769 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 CELSR3Q9NYQ7 3312 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 NINQ8N4C6 2090 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 AHCTF1Q8WYP5 2266 aa1.35□□□□□ -2.19
SVIP-203ENST00000529848 ANKRD36A6QL64 1941 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 DMXL2Q8TDJ6 3036 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 SPTBN1Q01082 2364 aaKnown RBP1.34□□□□□ -2.19
SVIP-203ENST00000529848 FREM2Q5SZK8 3169 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 RTTNQ86VV8 2226 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 CREBBPQ92793 2442 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 ANKRD17O75179 2603 aaKnown RBP1.34□□□□□ -2.19
SVIP-203ENST00000529848 A0A087WSZ3 146 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 FXYD6-FXYD2A0A087WZ82 144 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 TRBV10-3A0A0K0K1G6 114 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 TEX49A0A1B0GTD5 131 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 CXorf51AA0A1B0GTR3 108 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 IQCF6A8MYZ5 107 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 FXYD1O00168 92 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 HCRTO43612 131 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 MIR22HGQ0VDD5 57 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 DEFB113Q30KQ7 82 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 SFTA2Q6UW10 78 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 C20orf197Q8N268 126 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 Q8N6K4 173 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 FAM167A-AS1Q96KT0 104 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 FXYD6Q9H0Q3 95 aa1.34□□□□□ -2.19
SVIP-203ENST00000529848 NHP2Q9NX24 153 aaKnown RBP1.34□□□□□ -2.19
SVIP-203ENST00000529848 NBEAQ8NFP9 2946 aa1.34□□□□□ -2.2
SVIP-203ENST00000529848 NBPF19A0A087WUL8 3843 aa1.34□□□□□ -2.2
SVIP-203ENST00000529848 TRBV25-1A0A075B6N4 114 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 F8WEM9 126 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 BCE1O60756 84 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 MIFP14174 115 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 HMGA1P17096 107 aaKnown RBP1.33□□□□□ -2.2
SVIP-203ENST00000529848 GCHFRP30047 84 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 KRTAP26-1Q6PEX3 210 aa1.33□□□□□ -2.2
SVIP-203ENST00000529848 C14orf132Q9NPU4 83 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms