RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 WFDC2Q14508 124 aa1.23□□□□□ -2.21
C11orf88-204ENST00000529661 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
C11orf88-204ENST00000529661 PLAC8Q9NZF1 115 aa1.23□□□□□ -2.21
C11orf88-204ENST00000529661 C1orf167Q5SNV9 1468 aa1.23□□□□□ -2.21
C11orf88-204ENST00000529661 CACNA1AO00555 2505 aa1.23□□□□□ -2.21
C11orf88-204ENST00000529661 NHSL1Q5SYE7 1610 aa1.22□□□□□ -2.21
C11orf88-204ENST00000529661 CCDC88BA6NC98 1476 aa1.22□□□□□ -2.21
C11orf88-204ENST00000529661 LRP6O75581 1613 aa1.22□□□□□ -2.21
C11orf88-204ENST00000529661 ABCA8O94911 1581 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 A0A0G2JMZ2 1700 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 PKD1L2Q7Z442 2459 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 LEPROTL1O95214 131 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 C10orf113Q5VZT2 155 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 Q6JHZ5 121 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 SPATA8Q6RVD6 105 aa1.21□□□□□ -2.22
C11orf88-204ENST00000529661 ASH1LQ9NR48 2969 aaKnown RBP1.21□□□□□ -2.22
C11orf88-204ENST00000529661 ABCC1P33527 1531 aa1.2□□□□□ -2.22
C11orf88-204ENST00000529661 D6R8Y8 96 aa1.2□□□□□ -2.22
C11orf88-204ENST00000529661 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
C11orf88-204ENST00000529661 SCN11AQ9UI33 1791 aa1.2□□□□□ -2.22
C11orf88-204ENST00000529661 NCOA2Q15596 1464 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 IQCF6A8MYZ5 107 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 HAMPP81172 84 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 ANKARQ7Z5J8 1434 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 FDCSPQ8NFU4 85 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
C11orf88-204ENST00000529661 LAMC1P11047 1609 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 DNMBPQ6XZF7 1577 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 TRBV6-1A0A0K0K1D8 114 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 MYMXA0A1B0GTQ4 84 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 H0Y9P7 68 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 BVES-AS1Q5T3Y7 98 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 UBE2DNLQ8IWF7 75 aa1.18□□□□□ -2.22
C11orf88-204ENST00000529661 FAM208BQ5VWN6 2430 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 IGLC2P0DOY2 106 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 IGLC3P0DOY3 106 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 PLGLAQ15195 96 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 MYO5CQ9NQX4 1742 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 ERCC6L2Q5T890 1561 aa1.17□□□□□ -2.22
C11orf88-204ENST00000529661 ARFGEF2Q9Y6D5 1785 aa1.16□□□□□ -2.22
C11orf88-204ENST00000529661 ANKRD17O75179 2603 aaKnown RBP1.16□□□□□ -2.22
C11orf88-204ENST00000529661 DEFB107AQ8IZN7 70 aa1.16□□□□□ -2.22
C11orf88-204ENST00000529661 ATP7BP35670 1465 aa1.16□□□□□ -2.22
C11orf88-204ENST00000529661 SAMD9Q5K651 1589 aa1.16□□□□□ -2.22
C11orf88-204ENST00000529661 H3BUT2 72 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 S100A3P33764 101 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 SPINK7P58062 85 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 CCDC141Q6ZP82 1450 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 RGPD1P0DJD0 1748 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 KIAA0556O60303 1618 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 IQGAP3Q86VI3 1631 aa1.15□□□□□ -2.23
C11orf88-204ENST00000529661 ZC3H13Q5T200 1668 aaKnown RBP1.14□□□□□ -2.23
C11orf88-204ENST00000529661 A0A0D9SG42 100 aa1.14□□□□□ -2.23
C11orf88-204ENST00000529661 CEBPZOSA8MTT3 80 aa1.14□□□□□ -2.23
C11orf88-204ENST00000529661 QSER1Q2KHR3 1735 aa1.14□□□□□ -2.23
C11orf88-204ENST00000529661 TULP4Q9NRJ4 1543 aa1.14□□□□□ -2.23
C11orf88-204ENST00000529661 LRRC37AA6NMS7 1700 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 GNGT1P63211 74 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 DEFB121Q5J5C9 76 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 SSBP3-AS1Q7Z2R9 100 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 C6orf201Q7Z4U5 140 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 C18orf32Q8TCD1 76 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 PIK3C2BO00750 1634 aa1.13□□□□□ -2.23
C11orf88-204ENST00000529661 GOLGA4Q13439 2230 aaKnown RBP1.13□□□□□ -2.23
C11orf88-204ENST00000529661 COL14A1Q05707 1796 aaKnown RBP1.13□□□□□ -2.23
C11orf88-204ENST00000529661 NKTRP30414 1462 aaKnown RBP1.12□□□□□ -2.23
C11orf88-204ENST00000529661 URB1O60287 2271 aaKnown RBP1.12□□□□□ -2.23
C11orf88-204ENST00000529661 UGGT2Q9NYU1 1516 aa1.12□□□□□ -2.23
C11orf88-204ENST00000529661 SMCO4Q9NRQ5 59 aa1.12□□□□□ -2.23
C11orf88-204ENST00000529661 ZNF462Q96JM2 2506 aa1.12□□□□□ -2.23
C11orf88-204ENST00000529661 UBR3Q6ZT12 1888 aa1.12□□□□□ -2.23
C11orf88-204ENST00000529661 PAPPAQ13219 1627 aa1.11□□□□□ -2.23
C11orf88-204ENST00000529661 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
C11orf88-204ENST00000529661 URB2Q14146 1524 aaKnown RBP1.1□□□□□ -2.23
C11orf88-204ENST00000529661 POLR1AO95602 1720 aaPredicted RBP1.1□□□□□ -2.23
C11orf88-204ENST00000529661 TIAM2Q8IVF5 1701 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 ADAMTS12P58397 1594 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 CEP170BQ9Y4F5 1589 aaPredicted RBP1.1□□□□□ -2.23
C11orf88-204ENST00000529661 A0A0D9SFI3 127 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 A0A1B0GU69 56 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 A0A1B0GUT8 65 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 ERICH3Q5RHP9 1530 aa1.1□□□□□ -2.23
C11orf88-204ENST00000529661 BCORQ6W2J9 1755 aa1.09□□□□□ -2.23
C11orf88-204ENST00000529661 TRBV7-4A0A0J9YYF1 115 aa1.09□□□□□ -2.23
C11orf88-204ENST00000529661 PDCD5O14737 125 aa1.09□□□□□ -2.23
C11orf88-204ENST00000529661 CFDP00746 253 aaPredicted RBP1.09□□□□□ -2.23
C11orf88-204ENST00000529661 FAM103A1Q9BTL3 118 aaKnown RBP1.09□□□□□ -2.23
C11orf88-204ENST00000529661 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
C11orf88-204ENST00000529661 ZNF831Q5JPB2 1677 aa1.09□□□□□ -2.24
C11orf88-204ENST00000529661 MAGI3Q5TCQ9 1506 aa1.09□□□□□ -2.24
C11orf88-204ENST00000529661 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
C11orf88-204ENST00000529661 SETBP1Q9Y6X0 1596 aa1.08□□□□□ -2.24
C11orf88-204ENST00000529661 CFAP43Q8NDM7 1665 aa1.07□□□□□ -2.24
C11orf88-204ENST00000529661 ITSN1Q15811 1721 aa1.07□□□□□ -2.24
C11orf88-204ENST00000529661 SLIT1O75093 1534 aa1.07□□□□□ -2.24
C11orf88-204ENST00000529661 LINC00959A0A1B0GUT2 108 aa1.07□□□□□ -2.24
C11orf88-204ENST00000529661 ATP5EP2Q5VTU8 51 aa1.07□□□□□ -2.24
C11orf88-204ENST00000529661 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms