RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PFDN1O60925 122 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 G0S2P27469 103 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 RAB5CP51148 216 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 SMAGPQ0VAQ4 97 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 PMVKQ15126 192 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 ZNF56Q15929 161 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 FAM231DQ6ZW35 169 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 LINC00269Q8N2A0 174 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 GATD1Q8NB37 220 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 CNFNQ9BYD5 112 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 MANBALQ9NQG1 85 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 NIT2Q9NQR4 276 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 BIN3Q9NQY0 253 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 PLAC8Q9NZF1 115 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 IGHV3-64A0A075B6Q5 118 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 A0A1B0GXF2 115 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 ARPC5O15511 151 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 PDE6DO43924 150 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 NCR2O95944 276 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 HLA-DQA1P01909 254 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 TRGC1P0CF51 173 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 RPL35P42766 123 aaKnown RBP2.68□□□□□ -1.98
CSDE1-212ENST00000529046 CCL20P78556 96 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 ORMDL2Q53FV1 153 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 RASL11AQ6T310 242 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 TEX261Q6UWH6 196 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 AKAP14Q86UN6 197 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 RPP21Q9H633 154 aaKnown RBP2.68□□□□□ -1.98
CSDE1-212ENST00000529046 LINC00474Q9P2X8 69 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 PKIGQ9Y2B9 76 aa2.68□□□□□ -1.98
CSDE1-212ENST00000529046 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 IGLV4-60A0A075B6I1 120 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 IGLV10-54A0A075B6I4 117 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 TMEM238C9JI98 176 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 NTF3P20783 257 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 RPL23P62829 140 aaKnown RBP2.67□□□□□ -1.98
CSDE1-212ENST00000529046 DEFB116Q30KQ4 102 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 EIF5AL1Q6IS14 154 aaKnown RBP2.67□□□□□ -1.98
CSDE1-212ENST00000529046 FER1L6-AS1Q8NA97 138 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 OR2D3Q8NGH3 330 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 FAM213BQ8TBF2 198 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 LINC01600Q96MT4 127 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
CSDE1-212ENST00000529046 KANTRA0A1W2PQU2 76 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 CCL25O15444 150 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 ZNF25P17030 456 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-212ENST00000529046 GNG4P50150 75 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 SULT1A2P50226 295 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 FOXA3P55318 350 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-212ENST00000529046 MEF2BQ02080 365 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-212ENST00000529046 SPINK6Q6UWN8 80 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 LYZL1Q6UWQ5 148 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 COMMD7Q86VX2 200 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 TIMM17AQ99595 171 aa2.66□□□□□ -1.98
CSDE1-212ENST00000529046 TRBV20OR9-2A0A075B6H5 130 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 GVQW2A0A096LPI5 108 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-212ENST00000529046 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 MUC21A0A0G2JKD1 596 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 TRBV6-5A0A0K0K1A5 114 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 A0A0U1RQV1 116 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 MUC21A0A140T8X8 626 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 UBE2L6O14933 153 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 IFNA1P01562 189 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 TLX1NBP0CAT3 122 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 CENPWQ5EE01 88 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 OR5A1Q8NGJ0 315 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 DPH3Q96FX2 82 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 GNG13Q9P2W3 67 aa2.65□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 TGIF2-C20orf24A0A0A6YYL0 155 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 TMEM250H0YL14 139 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 MGPP08493 103 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 LINC00614P0C842 121 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 BCL2P10415 239 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 ESDP10768 282 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 COX6A2Q02221 97 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 C1orf195Q5TG92 126 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 CLPSL2Q6UWE3 100 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 SMIM15Q7Z3B0 74 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 MED9Q9NWA0 146 aa2.64□□□□□ -1.99
CSDE1-212ENST00000529046 IGHV1-58A0A0C4DH39 117 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 LOC389332A0A1B0GUA5 103 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 LINC00959A0A1B0GUT2 108 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 A0A1B0GV50 99 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 A0A1B0GVX0 72 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 SDHAF1A6NFY7 115 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 A8MWL6 223 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 C8orf87E5RJ46 101 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 NDUFC2-KCTD14E9PQ53 114 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 I3L3M4 83 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 PPP1R17O96001 155 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 APCSP02743 223 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 FGF6P10767 208 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms