RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, human

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSTF3-208	ENST00000528865	APOC4	P55056	127 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	HIST1H4A	P62805	103 aa	Known RBP	5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865		Q6JHZ5	121 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	CFAP161	Q6P656	301 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	LINC00269	Q8N2A0	174 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	TMEM126A	Q9H061	195 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	ORMDL1	Q9P0S3	153 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	SS18L2	Q9UHA2	77 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	C2CD3	Q4AC94	2353 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	TEX15	Q9BXT5	2789 aa		5.72	□□□□□ -1.49
CSTF3-208	ENST00000528865	ZAN	Q9Y493	2812 aa		5.71	□□□□□ -1.49
CSTF3-208	ENST00000528865	UBR5	O95071	2799 aa	Predicted RBP	5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	LRRK2	Q5S007	2527 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	FAM236A	A0A1B0GUQ0	79 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	FAM236B	A0A1B0GV22	79 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865		J3QKU1	62 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	MIF	P14174	115 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	REG3A	Q06141	175 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	LELP1	Q5T871	98 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865		Q8N814	137 aa		5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	SON	P18583	2426 aa	Known RBP	5.71	□□□□□ -1.5
CSTF3-208	ENST00000528865	MXRA5	Q9NR99	2828 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865		A0A0J9YWU9	116 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	CCK	P06307	115 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	IGHV4-30-4	P0DP06	118 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	C3orf22	Q8N5N4	141 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865		Q8NAQ8	132 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	SPATA3	Q8NHX4	192 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	C14orf132	Q9NPU4	83 aa		5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.7	□□□□□ -1.5
CSTF3-208	ENST00000528865	ABCA12	Q86UK0	2595 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865		A0A096LPF7	62 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	TMEM256-PLSCR3	K7ERE1	68 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	NCR3	O14931	201 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	ANG	P03950	147 aa	Known RBP	5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	SLPI	P03973	132 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	DAD1	P61803	113 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	CLPSL2	Q6UWE3	100 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	WFDC9	Q8NEX5	89 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	SMR3A	Q99954	134 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	C11orf68	Q9H3H3	251 aa	Known RBP	5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	PRR34	Q9NV39	138 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	LINC00846	Q9NV44	126 aa		5.69	□□□□□ -1.5
CSTF3-208	ENST00000528865	ITPR3	Q14573	2671 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	UQCRQ	O14949	82 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	SPART-AS1	P0CW21	52 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	PRR3	P79522	188 aa	Known RBP	5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	DEFB135	Q30KP9	77 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	LINC00526	Q96FQ7	95 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	CELSR2	Q9HCU4	2923 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	CSMD2	Q7Z408	3487 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	TLN2	Q9Y4G6	2542 aa		5.68	□□□□□ -1.5
CSTF3-208	ENST00000528865	ZFYVE26	Q68DK2	2539 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	WIPF1	O43516	503 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	S100A7L2	Q5SY68	101 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	LYPD5	Q6UWN5	251 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	LINC00575	Q6W349	94 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865		Q8NDZ9	215 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	C2orf48	Q96LS8	159 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865	CELA1	Q9UNI1	258 aa		5.67	□□□□□ -1.5
CSTF3-208	ENST00000528865		H3BQ85	93 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	ATOX1	O00244	68 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	IGLV6-57	P01721	117 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	COX7C	P15954	63 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	SPAG11B	Q08648	103 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	C9orf116	Q5BN46	136 aa	Predicted RBP	5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	C10orf25	Q5T742	122 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865		Q8N3U1	123 aa		5.66	□□□□□ -1.5
CSTF3-208	ENST00000528865	IGLV10-54	A0A075B6I4	117 aa		5.65	□□□□□ -1.5
CSTF3-208	ENST00000528865	DEFB4A	O15263	64 aa		5.65	□□□□□ -1.5
CSTF3-208	ENST00000528865	C6orf99	Q4VX62	202 aa		5.65	□□□□□ -1.5
CSTF3-208	ENST00000528865	ENHO	Q6UWT2	76 aa		5.65	□□□□□ -1.5
CSTF3-208	ENST00000528865	IGKV3D-7	A0A0C4DH55	119 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	TRBV10-3	A0A0K0K1G6	114 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	CYSRT1	A8MQ03	144 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	CRYGA	P11844	174 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	RPL18A	Q02543	176 aa	Known RBP	5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	ATP5EP2	Q5VTU8	51 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	C6orf223	Q8N319	242 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	SVIP	Q8NHG7	77 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	KRTAP3-3	Q9BYR6	98 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	KRTAP3-2	Q9BYR7	98 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	EPG5	Q9HCE0	2579 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	CHD6	Q8TD26	2715 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	APC	P25054	2843 aa		5.64	□□□□□ -1.51
CSTF3-208	ENST00000528865	LOC110117498	A0A087WWA1	95 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865	hADV29S1	A0JD25	119 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865		H3BNG1	76 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865	C4orf48	Q5BLP8	95 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865	C9orf153	Q5TBE3	101 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865	CCDC168	Q8NDH2	2452 aa		5.63	□□□□□ -1.51
CSTF3-208	ENST00000528865	CRYBG3	Q68DQ2	2970 aa		5.62	□□□□□ -1.51
CSTF3-208	ENST00000528865	ZNF561-AS1	K7EIQ3	104 aa		5.62	□□□□□ -1.51
CSTF3-208	ENST00000528865	KRTAP26-1	Q6PEX3	210 aa		5.62	□□□□□ -1.51
CSTF3-208	ENST00000528865	C6orf48	Q9UBA6	75 aa		5.62	□□□□□ -1.51
CSTF3-208	ENST00000528865	KLK12	Q9UKR0	248 aa		5.62	□□□□□ -1.51
CSTF3-208	ENST00000528865	JMJD1C	Q15652	2540 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms