RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
USH1C-207ENST00000527720 TRACP01848 142 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 HIVEP1P15822 2718 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 IGHV4-30-4P0DP06 118 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
USH1C-207ENST00000527720 CD164L2Q6UWJ8 174 aa10.58□□□□□ -0.72
USH1C-207ENST00000527720 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
USH1C-207ENST00000527720 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
USH1C-207ENST00000527720 CCL18P55774 89 aa10.57□□□□□ -0.72
USH1C-207ENST00000527720 IGKV2-28A0A075B6P5 120 aa10.56□□□□□ -0.72
USH1C-207ENST00000527720 IGKV2D-28P01615 120 aa10.56□□□□□ -0.72
USH1C-207ENST00000527720 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
USH1C-207ENST00000527720 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
USH1C-207ENST00000527720 LINC00337Q8N6G1 96 aa10.56□□□□□ -0.72
USH1C-207ENST00000527720 XGP55808 180 aa10.55□□□□□ -0.72
USH1C-207ENST00000527720 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
USH1C-207ENST00000527720 PFN2P35080 140 aa10.55□□□□□ -0.72
USH1C-207ENST00000527720 CXCL5P42830 114 aa10.55□□□□□ -0.72
USH1C-207ENST00000527720 REG3AQ06141 175 aa10.54□□□□□ -0.72
USH1C-207ENST00000527720 TRAV8-4A0A0B4J246 113 aa10.54□□□□□ -0.72
USH1C-207ENST00000527720 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
USH1C-207ENST00000527720 LELP1Q5T871 98 aa10.54□□□□□ -0.72
USH1C-207ENST00000527720 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
USH1C-207ENST00000527720 ATRQ13535 2644 aa10.53□□□□□ -0.72
USH1C-207ENST00000527720 MT-ATP8P03928 68 aa10.53□□□□□ -0.72
USH1C-207ENST00000527720 A0A1B0GV72 72 aa10.53□□□□□ -0.72
USH1C-207ENST00000527720 COX17Q14061 63 aa10.53□□□□□ -0.72
USH1C-207ENST00000527720 CKS1BP61024 79 aa10.52□□□□□ -0.73
USH1C-207ENST00000527720 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
USH1C-207ENST00000527720 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
USH1C-207ENST00000527720 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
USH1C-207ENST00000527720 H0YGX0 51 aa10.5□□□□□ -0.73
USH1C-207ENST00000527720 MALP21145 153 aa10.5□□□□□ -0.73
USH1C-207ENST00000527720 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
USH1C-207ENST00000527720 FAM218AQ96MZ4 157 aa10.5□□□□□ -0.73
USH1C-207ENST00000527720 HTN3P15516 51 aa10.49□□□□□ -0.73
USH1C-207ENST00000527720 Q8N3U1 123 aa10.48□□□□□ -0.73
USH1C-207ENST00000527720 BAALC-AS2P0C853 105 aa10.47□□□□□ -0.73
USH1C-207ENST00000527720 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
USH1C-207ENST00000527720 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
USH1C-207ENST00000527720 KLK5Q9Y337 293 aaPredicted RBP10.47□□□□□ -0.73
USH1C-207ENST00000527720 H3BNG1 76 aa10.46□□□□□ -0.73
USH1C-207ENST00000527720 NDUFC2O95298 119 aa10.46□□□□□ -0.73
USH1C-207ENST00000527720 MUC7Q8TAX7 377 aa10.46□□□□□ -0.73
USH1C-207ENST00000527720 SNCGO76070 127 aa10.45□□□□□ -0.74
USH1C-207ENST00000527720 TRRAPQ9Y4A5 3859 aa10.45□□□□□ -0.74
USH1C-207ENST00000527720 ACYP1P07311 99 aa10.45□□□□□ -0.74
USH1C-207ENST00000527720 OR13C6PQ8NH95 151 aa10.45□□□□□ -0.74
USH1C-207ENST00000527720 DNAL4O96015 105 aa10.44□□□□□ -0.74
USH1C-207ENST00000527720 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
USH1C-207ENST00000527720 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
USH1C-207ENST00000527720 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
USH1C-207ENST00000527720 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
USH1C-207ENST00000527720 C22orf24Q9Y442 160 aa10.42□□□□□ -0.74
USH1C-207ENST00000527720 A0A087WYN8 130 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 Q6Q795 121 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 SPAG11BQ08648 103 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 Q9HAA7 133 aa10.41□□□□□ -0.74
USH1C-207ENST00000527720 ENHOQ6UWT2 76 aa10.4□□□□□ -0.74
USH1C-207ENST00000527720 A0A0J9YWU9 116 aa10.4□□□□□ -0.75
USH1C-207ENST00000527720 TMEM126AQ9H061 195 aa10.4□□□□□ -0.75
USH1C-207ENST00000527720 A0A1B0GX51 115 aa10.39□□□□□ -0.75
USH1C-207ENST00000527720 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
USH1C-207ENST00000527720 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
USH1C-207ENST00000527720 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
USH1C-207ENST00000527720 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
USH1C-207ENST00000527720 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
USH1C-207ENST00000527720 F8P00451 2351 aa10.38□□□□□ -0.75
USH1C-207ENST00000527720 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
USH1C-207ENST00000527720 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
USH1C-207ENST00000527720 RETNQ9HD89 108 aa10.37□□□□□ -0.75
USH1C-207ENST00000527720 LECT2O14960 151 aa10.37□□□□□ -0.75
USH1C-207ENST00000527720 NANOS2P60321 138 aaKnown RBP10.37□□□□□ -0.75
USH1C-207ENST00000527720 CYSRT1A8MQ03 144 aa10.36□□□□□ -0.75
USH1C-207ENST00000527720 C3orf56Q8N813 242 aa10.36□□□□□ -0.75
USH1C-207ENST00000527720 UNQ6190/PRO20217Q6UXQ8 127 aa10.36□□□□□ -0.75
USH1C-207ENST00000527720 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
USH1C-207ENST00000527720 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
USH1C-207ENST00000527720 Q6ZTC4 211 aa10.35□□□□□ -0.75
USH1C-207ENST00000527720 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
USH1C-207ENST00000527720 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
USH1C-207ENST00000527720 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
USH1C-207ENST00000527720 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
USH1C-207ENST00000527720 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
USH1C-207ENST00000527720 SDIM1Q6ZPB5 146 aa10.33□□□□□ -0.76
USH1C-207ENST00000527720 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
USH1C-207ENST00000527720 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
USH1C-207ENST00000527720 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
USH1C-207ENST00000527720 Q8N814 137 aa10.31□□□□□ -0.76
USH1C-207ENST00000527720 NCR3O14931 201 aa10.3□□□□□ -0.76
USH1C-207ENST00000527720 LINC00643Q86TS7 51 aa10.3□□□□□ -0.76
USH1C-207ENST00000527720 Q8NDZ9 215 aa10.3□□□□□ -0.76
USH1C-207ENST00000527720 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
USH1C-207ENST00000527720 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
USH1C-207ENST00000527720 IMUPQ9GZP8 106 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms