RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 MGAM2Q2M2H8 2515 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 NCOA6Q14686 2063 aaPredicted RBP1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 HYDINQ4G0P3 5121 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 FAM24AA6NFZ4 105 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 TMEM262E9PQX1 116 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 GNGT2O14610 69 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 IGLV3-19P01714 112 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 IGHV3-33P01772 117 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 TRAPPC2P0DI81 140 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 TRAPPC2BP0DI82 140 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 SLC25A6P12236 298 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 IL7P13232 177 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 UBE2G1P62253 170 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 INSL4Q14641 139 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 C12orf73Q69YU5 71 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 HCP5Q6MZN7 132 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 COMMD6Q7Z4G1 85 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 WFDC6Q9BQY6 131 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 ORMDL1Q9P0S3 153 aa1.95□□□□□ -2.1
CLNS1A-208ENST00000527265 TNRC6BQ9UPQ9 1833 aaKnown RBP1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 DOCK10Q96BY6 2186 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 MRPS14O60783 128 aaKnown RBP1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 IGKCP01834 107 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 TFF1P04155 84 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 COX7CP15954 63 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 RBM3P98179 157 aaKnown RBP1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 DEFB124Q8NES8 71 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 PATE1Q8WXA2 126 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 DPH3P1Q9H4G8 78 aa1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 EPPK1P58107 5090 aaKnown RBP1.94□□□□□ -2.1
CLNS1A-208ENST00000527265 BSNQ9UPA5 3926 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 UBA52P62987 128 aaKnown RBP1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 C9orf116Q5BN46 136 aaPredicted RBP1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 SBSPONQ8IVN8 264 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 PPDPFLQ8WWR9 84 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 ANK2Q01484 3957 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 ESPL1Q14674 2120 aa1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 HEATR1Q9H583 2144 aaKnown RBP1.93□□□□□ -2.1
CLNS1A-208ENST00000527265 SONP18583 2426 aaKnown RBP1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 MAP1AP78559 2803 aaPredicted RBP1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 TENM3Q9P273 2699 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 CXorf51AA0A1B0GTR3 108 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 TMEM30CPA0ZSE6 113 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 A6NIN4 97 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 RNASE3P12724 160 aaKnown RBP1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 CBLN1P23435 193 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 CAV3P56539 151 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 C10orf55Q5SWW7 151 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 SLC48A1Q6P1K1 146 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 UNQ5815/PRO19632Q6UWF5 114 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 LYPD5Q6UWN5 251 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 C5orf38Q86SI9 138 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 MED12LQ86YW9 2145 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 C9orf62Q8N4C0 152 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 TXNDC17Q9BRA2 123 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 V9GYS6 101 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 DNAJC13O75165 2243 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 KNTC1P50748 2209 aa1.92□□□□□ -2.1
CLNS1A-208ENST00000527265 IGKV1D-17A0A075B6S4 117 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 RBAKDNA6NC62 111 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 CPSF4LA6NMK7 179 aaKnown RBP1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 H3BRM9 83 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 HMGN4O00479 90 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 PRB2P02812 416 aaPredicted RBP1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 SNCAP37840 140 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 DCDP81605 110 aaKnown RBP1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 IQCJQ1A5X6 159 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 FAM74A1Q5RGS3 127 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 COX14Q96I36 57 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 TTTY10Q9BZA0 68 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 TMEM106BQ9NUM4 274 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 V9GYH0 126 aa1.91□□□□□ -2.1
CLNS1A-208ENST00000527265 ZNF469Q96JG9 3925 aaPredicted RBP1.9□□□□□ -2.1
CLNS1A-208ENST00000527265 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 A0A0J9YY99 117 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 MT-ATP8P03928 68 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 DEFB110Q30KQ9 67 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 SPTSSBQ8NFR3 76 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 LIMD2Q9BT23 127 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 CDC42SE1Q9NRR8 79 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 MED9Q9NWA0 146 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 LINC00312Q9Y6C7 94 aa1.9□□□□□ -2.11
CLNS1A-208ENST00000527265 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 UBE2L5PA0A1B0GUS4 154 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 TRBV6-4A0A1B0GX49 114 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 NUPR1O60356 82 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 HMGN2P05204 90 aaKnown RBP1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 FXYD6P3P58550 94 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 SNRPGP62308 76 aaKnown RBP1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 UBE2L3P68036 154 aaKnown RBP1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 PP632Q6XCG6 107 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 COA5Q86WW8 74 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 DEFB119Q8N690 84 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 REG4Q9BYZ8 158 aa1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 MRPL36Q9P0J6 103 aaKnown RBP1.89□□□□□ -2.11
CLNS1A-208ENST00000527265 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms