RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
NEDD8-205ENST00000527046 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
NEDD8-205ENST00000527046 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
NEDD8-205ENST00000527046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-205ENST00000527046 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
NEDD8-205ENST00000527046 H0Y8G0 127 aa6.87□□□□□ -1.31
NEDD8-205ENST00000527046 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
NEDD8-205ENST00000527046 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
NEDD8-205ENST00000527046 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
NEDD8-205ENST00000527046 F8WDY8 70 aa6.86□□□□□ -1.31
NEDD8-205ENST00000527046 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-205ENST00000527046 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
NEDD8-205ENST00000527046 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
NEDD8-205ENST00000527046 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
NEDD8-205ENST00000527046 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
NEDD8-205ENST00000527046 CDK2AP2O75956 126 aa6.85□□□□□ -1.31
NEDD8-205ENST00000527046 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
NEDD8-205ENST00000527046 HAMPP81172 84 aa6.85□□□□□ -1.31
NEDD8-205ENST00000527046 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
NEDD8-205ENST00000527046 A0A096LNI7 61 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-205ENST00000527046 H3BRM9 83 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 NDUFA1O15239 70 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 DPM2O94777 84 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 IGKCP01834 107 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 KRTDAPP60985 99 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 C6orf226Q5I0X4 101 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.31
NEDD8-205ENST00000527046 EPM2AB3EWF7 344 aa6.83□□□□□ -1.32
NEDD8-205ENST00000527046 S100A6P06703 90 aa6.83□□□□□ -1.32
NEDD8-205ENST00000527046 TLX1NBP0CAT3 122 aa6.83□□□□□ -1.32
NEDD8-205ENST00000527046 TSPEAR-AS2P59090 65 aa6.83□□□□□ -1.32
NEDD8-205ENST00000527046 CIRBP-AS1Q8TBR5 109 aa6.83□□□□□ -1.32
NEDD8-205ENST00000527046 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-205ENST00000527046 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
NEDD8-205ENST00000527046 PLNP26678 52 aa6.82□□□□□ -1.32
NEDD8-205ENST00000527046 Q6ZRP5 223 aa6.82□□□□□ -1.32
NEDD8-205ENST00000527046 SPACA4Q8TDM5 124 aa6.82□□□□□ -1.32
NEDD8-205ENST00000527046 PRSS2P07478 247 aa6.81□□□□□ -1.32
NEDD8-205ENST00000527046 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-205ENST00000527046 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
NEDD8-205ENST00000527046 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
NEDD8-205ENST00000527046 STPG4Q8N801 248 aa6.81□□□□□ -1.32
NEDD8-205ENST00000527046 RYR1P21817 5038 aa6.81□□□□□ -1.32
NEDD8-205ENST00000527046 A0A087WYN8 130 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 LEPROTO15243 131 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 S100A2P29034 98 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 CXCL5P42830 114 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 CKS1BP61024 79 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
NEDD8-205ENST00000527046 HSPG2P98160 4391 aa6.8□□□□□ -1.32
NEDD8-205ENST00000527046 E9PLD3 99 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
NEDD8-205ENST00000527046 IGKV2-24A0A0C4DH68 120 aa6.78□□□□□ -1.32
NEDD8-205ENST00000527046 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
NEDD8-205ENST00000527046 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
NEDD8-205ENST00000527046 FAT1Q14517 4588 aa6.77□□□□□ -1.33
NEDD8-205ENST00000527046 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
NEDD8-205ENST00000527046 J3QQQ9 107 aa6.77□□□□□ -1.33
NEDD8-205ENST00000527046 SMR3BP02814 79 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-205ENST00000527046 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
NEDD8-205ENST00000527046 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
NEDD8-205ENST00000527046 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-205ENST00000527046 GAGE2EQ4V326 116 aa6.76□□□□□ -1.33
NEDD8-205ENST00000527046 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
NEDD8-205ENST00000527046 GAGE2DQ9UEU5 116 aa6.76□□□□□ -1.33
NEDD8-205ENST00000527046 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
NEDD8-205ENST00000527046 HERC2O95714 4834 aa6.76□□□□□ -1.33
NEDD8-205ENST00000527046 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
NEDD8-205ENST00000527046 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
NEDD8-205ENST00000527046 Q8NDZ9 215 aa6.75□□□□□ -1.33
NEDD8-205ENST00000527046 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
NEDD8-205ENST00000527046 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
NEDD8-205ENST00000527046 PFN2P35080 140 aa6.74□□□□□ -1.33
NEDD8-205ENST00000527046 Q8N1X5 172 aa6.74□□□□□ -1.33
NEDD8-205ENST00000527046 HERVK_113P61574 105 aa6.73□□□□□ -1.33
NEDD8-205ENST00000527046 COX17Q14061 63 aa6.73□□□□□ -1.33
NEDD8-205ENST00000527046 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-205ENST00000527046 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
NEDD8-205ENST00000527046 LITAFQ99732 161 aa6.73□□□□□ -1.33
NEDD8-205ENST00000527046 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
NEDD8-205ENST00000527046 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 C20orf202A1L168 122 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-205ENST00000527046 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 HERV-K104P63124 156 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
NEDD8-205ENST00000527046 A0A0U1RRA0 63 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms