RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
SMPD1-202ENST00000526280 SLPIP03973 132 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 MALP21145 153 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 HSD52Q0P140 79 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 PMVKQ15126 192 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 LINC00469Q8N7U9 141 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
SMPD1-202ENST00000526280 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
SMPD1-202ENST00000526280 HIGD1BQ9P298 99 aa8.39□□□□□ -1.07
SMPD1-202ENST00000526280 HERC2O95714 4834 aa8.39□□□□□ -1.07
SMPD1-202ENST00000526280 A0A087WZ39 114 aa8.38□□□□□ -1.07
SMPD1-202ENST00000526280 SEC11AP67812 179 aa8.38□□□□□ -1.07
SMPD1-202ENST00000526280 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
SMPD1-202ENST00000526280 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
SMPD1-202ENST00000526280 KIAA1109Q2LD37 5005 aa8.37□□□□□ -1.07
SMPD1-202ENST00000526280 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
SMPD1-202ENST00000526280 APOMO95445 188 aa8.37□□□□□ -1.07
SMPD1-202ENST00000526280 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
SMPD1-202ENST00000526280 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
SMPD1-202ENST00000526280 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 IGHV3-64A0A075B6Q5 118 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
SMPD1-202ENST00000526280 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 CDK2AP2O75956 126 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 HERVK_113P63121 156 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
SMPD1-202ENST00000526280 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
SMPD1-202ENST00000526280 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
SMPD1-202ENST00000526280 E9PLD3 99 aa8.35□□□□□ -1.07
SMPD1-202ENST00000526280 Q6ZVH6 145 aa8.35□□□□□ -1.07
SMPD1-202ENST00000526280 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
SMPD1-202ENST00000526280 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 HERVK_113P61574 105 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
SMPD1-202ENST00000526280 HSPG2P98160 4391 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 A6NDN8 102 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 Q6ZSA8 131 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 RYR1P21817 5038 aa8.33□□□□□ -1.08
SMPD1-202ENST00000526280 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
SMPD1-202ENST00000526280 XGP55808 180 aa8.32□□□□□ -1.08
SMPD1-202ENST00000526280 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
SMPD1-202ENST00000526280 TAL2Q16559 108 aa8.32□□□□□ -1.08
SMPD1-202ENST00000526280 F8WDY8 70 aa8.31□□□□□ -1.08
SMPD1-202ENST00000526280 H3BRM9 83 aa8.31□□□□□ -1.08
SMPD1-202ENST00000526280 KIAA0087Q14695 138 aa8.31□□□□□ -1.08
SMPD1-202ENST00000526280 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
SMPD1-202ENST00000526280 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
SMPD1-202ENST00000526280 TMEM170BQ5T4T1 132 aa8.3□□□□□ -1.08
SMPD1-202ENST00000526280 Q6ZRU5 148 aa8.3□□□□□ -1.08
SMPD1-202ENST00000526280 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 VAMP3Q15836 100 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 CEND1Q8N111 149 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 TMEM223A0PJW6 202 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
SMPD1-202ENST00000526280 NDUFA1O15239 70 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 LEPROTO15243 131 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 ZNF22P17026 224 aaPredicted RBP8.28□□□□□ -1.08
SMPD1-202ENST00000526280 FXYD2P54710 66 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 Q8IZM0 81 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 HIST1H4GQ99525 98 aa8.28□□□□□ -1.08
SMPD1-202ENST00000526280 PANO1I0J062 215 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 PRSS2P07478 247 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 SPINK8P0C7L1 97 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 PTTG1IPP53801 180 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 HAMPP81172 84 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
SMPD1-202ENST00000526280 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 TOMM7Q9P0U1 55 aa8.27□□□□□ -1.09
SMPD1-202ENST00000526280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
SMPD1-202ENST00000526280 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
SMPD1-202ENST00000526280 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
SMPD1-202ENST00000526280 C2orf82Q6UX34 121 aa8.26□□□□□ -1.09
SMPD1-202ENST00000526280 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
SMPD1-202ENST00000526280 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 J3QQQ9 107 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 SCXQ7RTU7 201 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
SMPD1-202ENST00000526280 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms