RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 SMIM1B2RUZ4 78 aa14.01□□□□□ -0.17
CKLF-206ENST00000526149 TRGC2P03986 189 aa14.01□□□□□ -0.17
CKLF-206ENST00000526149 TRBV30A0A0K0K1B3 111 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 COLCA2A8K830 154 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 PRSS2P07478 247 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 C9orf116Q5BN46 136 aaPredicted RBP13.99□□□□□ -0.17
CKLF-206ENST00000526149 C6orf226Q5I0X4 101 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 C7orf33Q8WU49 177 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 PACRGQ96M98 296 aaPredicted RBP13.99□□□□□ -0.17
CKLF-206ENST00000526149 FAT3Q8TDW7 4589 aa13.99□□□□□ -0.17
CKLF-206ENST00000526149 CHCHD1Q96BP2 118 aaKnown RBP13.98□□□□□ -0.17
CKLF-206ENST00000526149 LRP1Q07954 4544 aaKnown RBP13.98□□□□□ -0.17
CKLF-206ENST00000526149 HERC1Q15751 4861 aa13.97□□□□□ -0.17
CKLF-206ENST00000526149 IGLC3P0DOY3 106 aa13.97□□□□□ -0.17
CKLF-206ENST00000526149 NDUFA6P56556 154 aa13.97□□□□□ -0.17
CKLF-206ENST00000526149 ATP5LO75964 103 aa13.95□□□□□ -0.18
CKLF-206ENST00000526149 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
CKLF-206ENST00000526149 CKS1BP61024 79 aa13.95□□□□□ -0.18
CKLF-206ENST00000526149 GAGE2EQ4V326 116 aa13.94□□□□□ -0.18
CKLF-206ENST00000526149 GAGE2DQ9UEU5 116 aa13.94□□□□□ -0.18
CKLF-206ENST00000526149 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
CKLF-206ENST00000526149 KRTAP29-1A8MX34 341 aaPredicted RBP13.93□□□□□ -0.18
CKLF-206ENST00000526149 NDUFC2-KCTD14E9PQ53 114 aa13.93□□□□□ -0.18
CKLF-206ENST00000526149 LINC00310P59036 64 aa13.93□□□□□ -0.18
CKLF-206ENST00000526149 COX7B2Q8TF08 81 aa13.93□□□□□ -0.18
CKLF-206ENST00000526149 SCO1O75880 301 aa13.92□□□□□ -0.18
CKLF-206ENST00000526149 ZNF22P17026 224 aaPredicted RBP13.92□□□□□ -0.18
CKLF-206ENST00000526149 PRR3P79522 188 aaKnown RBP13.92□□□□□ -0.18
CKLF-206ENST00000526149 BAGE3Q86Y29 109 aa13.92□□□□□ -0.18
CKLF-206ENST00000526149 KRTAP7-1Q8IUC3 87 aa13.92□□□□□ -0.18
CKLF-206ENST00000526149 F8VRH5 84 aa13.91□□□□□ -0.18
CKLF-206ENST00000526149 FAM19A2Q8N3H0 131 aa13.91□□□□□ -0.18
CKLF-206ENST00000526149 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.18
CKLF-206ENST00000526149 PHF5AQ7RTV0 110 aaKnown RBP13.9□□□□□ -0.18
CKLF-206ENST00000526149 C11orf86A6NJI1 115 aa13.89□□□□□ -0.19
CKLF-206ENST00000526149 H3BRM9 83 aa13.89□□□□□ -0.19
CKLF-206ENST00000526149 CXCL5P42830 114 aa13.89□□□□□ -0.19
CKLF-206ENST00000526149 DMBT1Q9UGM3 2413 aaPredicted RBP13.88□□□□□ -0.19
CKLF-206ENST00000526149 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
CKLF-206ENST00000526149 HSBP1O75506 76 aa13.88□□□□□ -0.19
CKLF-206ENST00000526149 IFI27L1Q96BM0 104 aa13.88□□□□□ -0.19
CKLF-206ENST00000526149 NUPR1O60356 82 aa13.87□□□□□ -0.19
CKLF-206ENST00000526149 SERF1AO75920 110 aa13.87□□□□□ -0.19
CKLF-206ENST00000526149 FAM19A5Q7Z5A7 132 aaPredicted RBP13.86□□□□□ -0.19
CKLF-206ENST00000526149 CHTOPQ9Y3Y2 248 aaKnown RBP13.86□□□□□ -0.19
CKLF-206ENST00000526149 TRAV12-1A0A0B4J245 112 aa13.85□□□□□ -0.19
CKLF-206ENST00000526149 KRTAP11-1Q8IUC1 163 aa13.85□□□□□ -0.19
CKLF-206ENST00000526149 J3QL48 77 aa13.84□□□□□ -0.19
CKLF-206ENST00000526149 OXTP01178 125 aa13.84□□□□□ -0.19
CKLF-206ENST00000526149 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
CKLF-206ENST00000526149 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
CKLF-206ENST00000526149 PSORS1C2Q9UIG4 136 aa13.82□□□□□ -0.2
CKLF-206ENST00000526149 SRSF9Q13242 221 aaKnown RBP eCLIP13.8□□□□□ -0.2
CKLF-206ENST00000526149 SERTAD4-AS1Q5TG53 156 aa13.8□□□□□ -0.2
CKLF-206ENST00000526149 M0QXV9 152 aa13.78□□□□□ -0.2
CKLF-206ENST00000526149 LEPROTL1O95214 131 aa13.78□□□□□ -0.2
CKLF-206ENST00000526149 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
CKLF-206ENST00000526149 ODF1Q14990 250 aa13.76□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BKO60814 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BJP06899 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BOP23527 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BBP33778 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BDP58876 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BCP62807 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST2H2BEQ16778 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.75□□□□□ -0.21
CKLF-206ENST00000526149 SPINK6Q6UWN8 80 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BHQ93079 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BNQ99877 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 HIST1H2BMQ99879 126 aa13.75□□□□□ -0.21
CKLF-206ENST00000526149 FABP4P15090 132 aa13.74□□□□□ -0.21
CKLF-206ENST00000526149 C22orf24Q9Y442 160 aa13.74□□□□□ -0.21
CKLF-206ENST00000526149 H0Y8G0 127 aa13.73□□□□□ -0.21
CKLF-206ENST00000526149 MT1HL1P0DM35 61 aa13.73□□□□□ -0.21
CKLF-206ENST00000526149 C1orf137Q5JT78 98 aa13.73□□□□□ -0.21
CKLF-206ENST00000526149 ZNF625Q96I27 306 aaPredicted RBP13.73□□□□□ -0.21
CKLF-206ENST00000526149 PFN2P35080 140 aa13.71□□□□□ -0.21
CKLF-206ENST00000526149 HSPB8Q9UJY1 196 aa13.71□□□□□ -0.21
CKLF-206ENST00000526149 UBE2BP63146 152 aa13.7□□□□□ -0.22
CKLF-206ENST00000526149 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
CKLF-206ENST00000526149 PLA2G2DQ9UNK4 145 aa13.69□□□□□ -0.22
CKLF-206ENST00000526149 TNXBP22105 4242 aa13.69□□□□□ -0.22
CKLF-206ENST00000526149 IGLV7-43P04211 117 aa13.68□□□□□ -0.22
CKLF-206ENST00000526149 TP73-AS1Q9UF72 201 aa13.67□□□□□ -0.22
CKLF-206ENST00000526149 PMCHL2Q9BQD1 86 aa13.66□□□□□ -0.22
CKLF-206ENST00000526149 IGLV5-37A0A075B6J1 123 aa13.65□□□□□ -0.22
CKLF-206ENST00000526149 COX17Q14061 63 aa13.65□□□□□ -0.22
CKLF-206ENST00000526149 LBHQ53QV2 105 aaPredicted RBP13.65□□□□□ -0.22
CKLF-206ENST00000526149 SFTA2Q6UW10 78 aa13.65□□□□□ -0.22
CKLF-206ENST00000526149 MRPL55Q7Z7F7 128 aaKnown RBP13.65□□□□□ -0.22
CKLF-206ENST00000526149 LINC01600Q96MT4 127 aa13.65□□□□□ -0.22
CKLF-206ENST00000526149 SND1-IT1Q9HBX3 110 aa13.65□□□□□ -0.22
CKLF-206ENST00000526149 LINC00167Q96N53 147 aa13.63□□□□□ -0.23
CKLF-206ENST00000526149 PLNP26678 52 aa13.62□□□□□ -0.23
CKLF-206ENST00000526149 DPM2O94777 84 aa13.61□□□□□ -0.23
CKLF-206ENST00000526149 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
CKLF-206ENST00000526149 REG3GQ6UW15 175 aa13.61□□□□□ -0.23
CKLF-206ENST00000526149 Q8NDZ9 215 aa13.61□□□□□ -0.23
CKLF-206ENST00000526149 MAP1LC3CQ9BXW4 147 aa13.61□□□□□ -0.23
CKLF-206ENST00000526149 GAGE10A6NGK3 116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms