RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 ARAP2Q8WZ64 1704 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 SPAG17Q6Q759 2223 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 ABCA12Q86UK0 2595 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 ICE1Q9Y2F5 2266 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 TRBV25-1A0A075B6N4 114 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 PCNX2A6NKB5 2137 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 UQCRHP07919 91 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 CCL18P55774 89 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 SMIM11AP58511 58 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 ADIRFQ15847 76 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 ALKAL2Q6UX46 152 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 Q6ZQY7 126 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 ZNF720Q7Z2F6 126 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 AMELXQ99217 191 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 PRO3102Q9H379 93 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 HIGD1BQ9P298 99 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 SPCS1Q9Y6A9 102 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 VPS13AQ96RL7 3174 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 MED13Q9UHV7 2174 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 UNC13CQ8NB66 2214 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 TEX15Q9BXT5 2789 aa1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 MDC1Q14676 2089 aaKnown RBP1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 COL5A3P25940 1745 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC4-207ENST00000526141 FRYQ5TBA9 3013 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 TRIOO75962 3097 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 EDC4Q6P2E9 1401 aaKnown RBP1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 LTBP2Q14767 1821 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 CITO14578 2027 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 FXYD1O00168 92 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 EFNA4P52798 201 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 SFTA2Q6UW10 78 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 SMIM5Q71RC9 77 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 ZCCHC13Q8WW36 166 aaKnown RBP1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 CCL19Q99731 98 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 WFDC6Q9BQY6 131 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 ST20Q9HBF5 79 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 MPDZO75970 2070 aa1.34□□□□□ -2.19
TRAPPC4-207ENST00000526141 RIF1Q5UIP0 2472 aaKnown RBP1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 ITPR1Q14643 2758 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 FAM186AA6NE01 2351 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 CACNA1HO95180 2353 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 EML5Q05BV3 1969 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 LOC400499M0QZD8 3231 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 SSC5DA1L4H1 1573 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 CEP295Q9C0D2 2601 aa1.34□□□□□ -2.2
TRAPPC4-207ENST00000526141 WDFY3Q8IZQ1 3526 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 NBEAQ8NFP9 2946 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 NRXN2Q9P2S2 1712 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 F8VRH5 84 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 SAA2P0DJI9 122 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 KRTAP10-10P60014 251 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 ETDBQ3ZM63 59 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 NMSQ5H8A3 153 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 C10orf99Q6UWK7 81 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 FAM223AQ8IWN6 122 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 LINC01600Q96MT4 127 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 TMEM14BQ9NUH8 114 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 ARL2-SNX15V9GYD0 113 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 MUC22E2RYF6 1773 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 RGPD2P0DJD1 1756 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 PTPRZ1P23471 2315 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 ANK1P16157 1881 aa1.33□□□□□ -2.2
TRAPPC4-207ENST00000526141 LRRC37A2A6NM11 1700 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 MRC1P22897 1456 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 CHD9Q3L8U1 2897 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 IGSF10Q6WRI0 2623 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 C2CD3Q4AC94 2353 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 A0A1W2PPM0 123 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 C10orf142B7Z368 130 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 M0R135 149 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 SNRPFP62306 86 aaKnown RBP1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 BAGE3Q86Y29 109 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 ARFGEF3Q5TH69 2177 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 IGF2RP11717 2491 aa1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 SPTAN1Q13813 2472 aaKnown RBP1.32□□□□□ -2.2
TRAPPC4-207ENST00000526141 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 GBF1Q92538 1859 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 CHD7Q9P2D1 2997 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 KANTRA0A1W2PQU2 76 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 F2Z2F3 143 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 UQCR11O14957 56 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 ACYP1P07311 99 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 WFDC2Q14508 124 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 HMGN3Q15651 99 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 PSMG4Q5JS54 123 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 BAGE2Q86Y30 109 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 Q96NJ1 140 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 LINC01558Q9Y6Z2 57 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 FAM208AQ9UK61 1670 aaKnown RBP1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 MED12LQ86YW9 2145 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 HEATR1Q9H583 2144 aaKnown RBP1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 FRYLO94915 3013 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 PLXNA2O75051 1894 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
TRAPPC4-207ENST00000526141 UBR5O95071 2799 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms