RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SCO1O75880 301 aa11.47□□□□□ -0.57
TSPAN4-216ENST00000526055 PRSS2P07478 247 aa11.46□□□□□ -0.57
TSPAN4-216ENST00000526055 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
TSPAN4-216ENST00000526055 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.57
TSPAN4-216ENST00000526055 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
TSPAN4-216ENST00000526055 Q8IZM0 81 aa11.45□□□□□ -0.58
TSPAN4-216ENST00000526055 ATP6V1G1O75348 118 aa11.44□□□□□ -0.58
TSPAN4-216ENST00000526055 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
TSPAN4-216ENST00000526055 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
TSPAN4-216ENST00000526055 URB1-AS1Q96HZ7 61 aa11.43□□□□□ -0.58
TSPAN4-216ENST00000526055 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
TSPAN4-216ENST00000526055 TINCRA0A1B0GVN0 87 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 HBDP02042 147 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 CKS1BP61024 79 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 C2orf82Q6UX34 121 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 BAGE3Q86Y29 109 aa11.42□□□□□ -0.58
TSPAN4-216ENST00000526055 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.58
TSPAN4-216ENST00000526055 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
TSPAN4-216ENST00000526055 IGLV5-45A0A087WSX0 123 aa11.4□□□□□ -0.58
TSPAN4-216ENST00000526055 CXCL5P42830 114 aa11.4□□□□□ -0.58
TSPAN4-216ENST00000526055 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
TSPAN4-216ENST00000526055 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
TSPAN4-216ENST00000526055 PMVKQ15126 192 aa11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 CST9LQ9H4G1 147 aa11.39□□□□□ -0.59
TSPAN4-216ENST00000526055 HSBP1O75506 76 aa11.38□□□□□ -0.59
TSPAN4-216ENST00000526055 PDZD11Q5EBL8 140 aa11.38□□□□□ -0.59
TSPAN4-216ENST00000526055 PSORS1C2Q9UIG4 136 aa11.38□□□□□ -0.59
TSPAN4-216ENST00000526055 A0A096LNJ9 63 aa11.37□□□□□ -0.59
TSPAN4-216ENST00000526055 F8VRH5 84 aa11.37□□□□□ -0.59
TSPAN4-216ENST00000526055 ATP5LO75964 103 aa11.37□□□□□ -0.59
TSPAN4-216ENST00000526055 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
TSPAN4-216ENST00000526055 ODF1Q14990 250 aa11.36□□□□□ -0.59
TSPAN4-216ENST00000526055 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
TSPAN4-216ENST00000526055 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
TSPAN4-216ENST00000526055 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-216ENST00000526055 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
TSPAN4-216ENST00000526055 H3BRM9 83 aa11.33□□□□□ -0.6
TSPAN4-216ENST00000526055 M0QXV9 152 aa11.33□□□□□ -0.6
TSPAN4-216ENST00000526055 SERF1AO75920 110 aa11.33□□□□□ -0.6
TSPAN4-216ENST00000526055 C1orf137Q5JT78 98 aa11.33□□□□□ -0.6
TSPAN4-216ENST00000526055 KRTAP7-1Q8IUC3 87 aa11.32□□□□□ -0.6
TSPAN4-216ENST00000526055 COX7B2Q8TF08 81 aa11.32□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
TSPAN4-216ENST00000526055 IGLV7-43P04211 117 aa11.3□□□□□ -0.6
TSPAN4-216ENST00000526055 NDUFA6P56556 154 aa11.3□□□□□ -0.6
TSPAN4-216ENST00000526055 UBE2BP63146 152 aa11.29□□□□□ -0.6
TSPAN4-216ENST00000526055 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
TSPAN4-216ENST00000526055 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
TSPAN4-216ENST00000526055 LINC00310P59036 64 aa11.28□□□□□ -0.6
TSPAN4-216ENST00000526055 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
TSPAN4-216ENST00000526055 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
TSPAN4-216ENST00000526055 TNXBP22105 4242 aa11.27□□□□□ -0.6
TSPAN4-216ENST00000526055 LEPROTL1O95214 131 aa11.27□□□□□ -0.61
TSPAN4-216ENST00000526055 KRTAP10-8P60410 259 aa11.27□□□□□ -0.61
TSPAN4-216ENST00000526055 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
TSPAN4-216ENST00000526055 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.61
TSPAN4-216ENST00000526055 DIRC1Q969H9 104 aa11.27□□□□□ -0.61
TSPAN4-216ENST00000526055 XAGE1AQ9HD64 81 aa11.26□□□□□ -0.61
TSPAN4-216ENST00000526055 TP73-AS1Q9UF72 201 aa11.26□□□□□ -0.61
TSPAN4-216ENST00000526055 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
TSPAN4-216ENST00000526055 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
TSPAN4-216ENST00000526055 TRAV12-1A0A0B4J245 112 aa11.24□□□□□ -0.61
TSPAN4-216ENST00000526055 ZNF22P17026 224 aaPredicted RBP11.24□□□□□ -0.61
TSPAN4-216ENST00000526055 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
TSPAN4-216ENST00000526055 NUPR1O60356 82 aa11.23□□□□□ -0.61
TSPAN4-216ENST00000526055 CHTOPQ9Y3Y2 248 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-216ENST00000526055 H0Y9J4 135 aa11.22□□□□□ -0.61
TSPAN4-216ENST00000526055 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
TSPAN4-216ENST00000526055 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-216ENST00000526055 FABP4P15090 132 aa11.2□□□□□ -0.62
TSPAN4-216ENST00000526055 MRPL55Q7Z7F7 128 aaKnown RBP11.2□□□□□ -0.62
TSPAN4-216ENST00000526055 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
TSPAN4-216ENST00000526055 IGLV5-37A0A075B6J1 123 aa11.18□□□□□ -0.62
TSPAN4-216ENST00000526055 COX17Q14061 63 aa11.18□□□□□ -0.62
TSPAN4-216ENST00000526055 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
TSPAN4-216ENST00000526055 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
TSPAN4-216ENST00000526055 H0Y8G0 127 aa11.16□□□□□ -0.62
TSPAN4-216ENST00000526055 ZNF861PO60384 105 aa11.16□□□□□ -0.62
TSPAN4-216ENST00000526055 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
TSPAN4-216ENST00000526055 UBR4Q5T4S7 5183 aa11.13□□□□□ -0.63
TSPAN4-216ENST00000526055 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
TSPAN4-216ENST00000526055 PLNP26678 52 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms