RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ARHGAP32A7KAX9 2087 aa9.78□□□□□ -0.84
LRRK1-202ENST00000525284 EIF4EBP1Q13541 118 aaPredicted RBP9.78□□□□□ -0.84
LRRK1-202ENST00000525284 ADAMTS9Q9P2N4 1935 aa9.78□□□□□ -0.84
LRRK1-202ENST00000525284 TMEM131Q92545 1883 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 NUP210LQ5VU65 1888 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 TANC2Q9HCD6 1990 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
LRRK1-202ENST00000525284 BRI3O95415 125 aa9.75□□□□□ -0.85
LRRK1-202ENST00000525284 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
LRRK1-202ENST00000525284 PCNX3Q9H6A9 2034 aa9.75□□□□□ -0.85
LRRK1-202ENST00000525284 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
LRRK1-202ENST00000525284 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
LRRK1-202ENST00000525284 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
LRRK1-202ENST00000525284 PRR14LQ5THK1 2151 aa9.74□□□□□ -0.85
LRRK1-202ENST00000525284 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
LRRK1-202ENST00000525284 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
LRRK1-202ENST00000525284 FBXL19-AS1Q494R0 122 aa9.73□□□□□ -0.85
LRRK1-202ENST00000525284 URB1-AS1Q96HZ7 61 aa9.72□□□□□ -0.85
LRRK1-202ENST00000525284 PCDH15Q96QU1 1955 aa9.72□□□□□ -0.85
LRRK1-202ENST00000525284 EDN2P20800 178 aa9.72□□□□□ -0.85
LRRK1-202ENST00000525284 SPATA3Q8NHX4 192 aa9.72□□□□□ -0.85
LRRK1-202ENST00000525284 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.85
LRRK1-202ENST00000525284 CRIPTQ9P021 101 aa9.71□□□□□ -0.85
LRRK1-202ENST00000525284 APLNQ9ULZ1 77 aa9.71□□□□□ -0.85
LRRK1-202ENST00000525284 SMR3AQ99954 134 aa9.7□□□□□ -0.86
LRRK1-202ENST00000525284 Q6ZRU5 148 aa9.7□□□□□ -0.86
LRRK1-202ENST00000525284 Q8NA96 180 aa9.7□□□□□ -0.86
LRRK1-202ENST00000525284 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
LRRK1-202ENST00000525284 LINC00310P59036 64 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 MOBPQ13875 183 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 KIAA1549Q9HCM3 1950 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 FHL2Q14192 279 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 C1orf134Q5TEV5 83 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
LRRK1-202ENST00000525284 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
LRRK1-202ENST00000525284 AMELXQ99217 191 aa9.67□□□□□ -0.86
LRRK1-202ENST00000525284 Q8N2B8 174 aa9.67□□□□□ -0.86
LRRK1-202ENST00000525284 HCFC1P51610 2035 aa9.67□□□□□ -0.86
LRRK1-202ENST00000525284 RPS28P62857 69 aaKnown RBP9.66□□□□□ -0.86
LRRK1-202ENST00000525284 IGLV1-40P01703 118 aa9.65□□□□□ -0.86
LRRK1-202ENST00000525284 DSCAMO60469 2012 aa9.65□□□□□ -0.86
LRRK1-202ENST00000525284 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.87
LRRK1-202ENST00000525284 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
LRRK1-202ENST00000525284 UTRNP46939 3433 aa9.64□□□□□ -0.87
LRRK1-202ENST00000525284 A0A1W2PNU3 283 aaPredicted RBP9.64□□□□□ -0.87
LRRK1-202ENST00000525284 A8MUN3 132 aa9.64□□□□□ -0.87
LRRK1-202ENST00000525284 Q6ZSN1 163 aa9.64□□□□□ -0.87
LRRK1-202ENST00000525284 F8WDY8 70 aa9.63□□□□□ -0.87
LRRK1-202ENST00000525284 OTOGLQ3ZCN5 2332 aa9.63□□□□□ -0.87
LRRK1-202ENST00000525284 CRIP3Q6Q6R5 217 aa9.63□□□□□ -0.87
LRRK1-202ENST00000525284 LINC00313P59037 77 aa9.63□□□□□ -0.87
LRRK1-202ENST00000525284 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
LRRK1-202ENST00000525284 CSPG4Q6UVK1 2322 aa9.62□□□□□ -0.87
LRRK1-202ENST00000525284 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
LRRK1-202ENST00000525284 TM2D3Q9BRN9 247 aa9.62□□□□□ -0.87
LRRK1-202ENST00000525284 TRAV22A0A0B4J277 110 aa9.62□□□□□ -0.87
LRRK1-202ENST00000525284 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
LRRK1-202ENST00000525284 DOPEY1Q5JWR5 2465 aa9.61□□□□□ -0.87
LRRK1-202ENST00000525284 MUC22E2RYF6 1773 aaPredicted RBP9.61□□□□□ -0.87
LRRK1-202ENST00000525284 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
LRRK1-202ENST00000525284 J3QL48 77 aa9.6□□□□□ -0.87
LRRK1-202ENST00000525284 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
LRRK1-202ENST00000525284 TECTAO75443 2155 aa9.59□□□□□ -0.87
LRRK1-202ENST00000525284 H3BPC8 53 aa9.59□□□□□ -0.87
LRRK1-202ENST00000525284 UQCR11O14957 56 aa9.58□□□□□ -0.88
LRRK1-202ENST00000525284 C11orf71Q6IPW1 123 aa9.58□□□□□ -0.88
LRRK1-202ENST00000525284 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
LRRK1-202ENST00000525284 Q96NJ1 140 aa9.57□□□□□ -0.88
LRRK1-202ENST00000525284 BCE1O60756 84 aa9.57□□□□□ -0.88
LRRK1-202ENST00000525284 COA5Q86WW8 74 aa9.56□□□□□ -0.88
LRRK1-202ENST00000525284 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
LRRK1-202ENST00000525284 A0A096LNJ9 63 aa9.56□□□□□ -0.88
LRRK1-202ENST00000525284 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
LRRK1-202ENST00000525284 LINC00167Q96N53 147 aa9.55□□□□□ -0.88
LRRK1-202ENST00000525284 LINC01554Q52M75 96 aa9.55□□□□□ -0.88
LRRK1-202ENST00000525284 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
LRRK1-202ENST00000525284 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
LRRK1-202ENST00000525284 CEP192Q8TEP8 1941 aa9.54□□□□□ -0.88
LRRK1-202ENST00000525284 AGRNO00468 2067 aa9.54□□□□□ -0.88
LRRK1-202ENST00000525284 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
LRRK1-202ENST00000525284 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
LRRK1-202ENST00000525284 PTPRSQ13332 1948 aa9.53□□□□□ -0.88
LRRK1-202ENST00000525284 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
LRRK1-202ENST00000525284 CD164Q04900 197 aa9.53□□□□□ -0.88
LRRK1-202ENST00000525284 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
LRRK1-202ENST00000525284 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
LRRK1-202ENST00000525284 Q6ZQT0 140 aa9.52□□□□□ -0.89
LRRK1-202ENST00000525284 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
LRRK1-202ENST00000525284 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
LRRK1-202ENST00000525284 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
LRRK1-202ENST00000525284 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
LRRK1-202ENST00000525284 NAV3Q8IVL0 2385 aa9.5□□□□□ -0.89
LRRK1-202ENST00000525284 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
LRRK1-202ENST00000525284 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
LRRK1-202ENST00000525284 LOC101927531A0A1B0GV80 90 aa9.49□□□□□ -0.89
LRRK1-202ENST00000525284 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
LRRK1-202ENST00000525284 LUZP6Q538Z0 58 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms