RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SNRPFP62306 86 aaKnown RBP2.6□□□□□ -1.99
CD44-213ENST00000525209 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
CD44-213ENST00000525209 ZNF818PQ6ZRF7 136 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 Q6ZTI0 123 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 VMO1Q7Z5L0 202 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 IFI27L1Q96BM0 104 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 MANBALQ9NQG1 85 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 HIVEP3Q5T1R4 2406 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 LRRK2Q5S007 2527 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 USP9YO00507 2555 aaPredicted RBP2.59□□□□□ -1.99
CD44-213ENST00000525209 FLNCQ14315 2725 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 TLN1Q9Y490 2541 aaKnown RBP2.59□□□□□ -1.99
CD44-213ENST00000525209 TRBV10-1A0A0K0K1A3 114 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 F2Z2F3 143 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 KLKP1Q107X0 134 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 RPS10P5Q9NQ39 176 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 PRO1854Q9UHT4 67 aa2.59□□□□□ -1.99
CD44-213ENST00000525209 UBR5O95071 2799 aaPredicted RBP2.59□□□□□ -2
CD44-213ENST00000525209 PRRC2CQ9Y520 2896 aaKnown RBP2.59□□□□□ -2
CD44-213ENST00000525209 INTS1Q8N201 2190 aaKnown RBP2.59□□□□□ -2
CD44-213ENST00000525209 ANKRD17O75179 2603 aaKnown RBP2.58□□□□□ -2
CD44-213ENST00000525209 ITPR2Q14571 2701 aa2.58□□□□□ -2
CD44-213ENST00000525209 CELSR2Q9HCU4 2923 aa2.58□□□□□ -2
CD44-213ENST00000525209 TRBV7-3A0A075B6L6 115 aa2.58□□□□□ -2
CD44-213ENST00000525209 TRAV23DV6A0A075B6W5 121 aa2.58□□□□□ -2
CD44-213ENST00000525209 A0A0G2JND7 137 aa2.58□□□□□ -2
CD44-213ENST00000525209 CTSGP08311 255 aa2.58□□□□□ -2
CD44-213ENST00000525209 EFNA4P52798 201 aa2.58□□□□□ -2
CD44-213ENST00000525209 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
CD44-213ENST00000525209 PMCHL1Q16048 86 aa2.58□□□□□ -2
CD44-213ENST00000525209 CSAG1Q6PB30 78 aa2.58□□□□□ -2
CD44-213ENST00000525209 Q8N6K4 173 aa2.58□□□□□ -2
CD44-213ENST00000525209 SMR3AQ99954 134 aa2.58□□□□□ -2
CD44-213ENST00000525209 DOCK10Q96BY6 2186 aa2.58□□□□□ -2
CD44-213ENST00000525209 CACNA1CQ13936 2221 aa2.58□□□□□ -2
CD44-213ENST00000525209 EXPH5Q8NEV8 1989 aa2.58□□□□□ -2
CD44-213ENST00000525209 SETD2Q9BYW2 2564 aaPredicted RBP2.57□□□□□ -2
CD44-213ENST00000525209 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
CD44-213ENST00000525209 TEX49A0A1B0GTD5 131 aa2.57□□□□□ -2
CD44-213ENST00000525209 UBE2D1P51668 147 aa2.57□□□□□ -2
CD44-213ENST00000525209 DEFB110Q30KQ9 67 aa2.57□□□□□ -2
CD44-213ENST00000525209 PYDC2Q56P42 97 aa2.57□□□□□ -2
CD44-213ENST00000525209 CFAP126Q5VTH2 177 aa2.57□□□□□ -2
CD44-213ENST00000525209 Q5VV11 94 aa2.57□□□□□ -2
CD44-213ENST00000525209 BPESC1Q9GZL8 116 aa2.57□□□□□ -2
CD44-213ENST00000525209 MPDZO75970 2070 aa2.57□□□□□ -2
CD44-213ENST00000525209 PRRC2AP48634 2157 aaKnown RBP2.57□□□□□ -2
CD44-213ENST00000525209 RELNP78509 3460 aa2.56□□□□□ -2
CD44-213ENST00000525209 NBPF19A0A087WUL8 3843 aa2.56□□□□□ -2
CD44-213ENST00000525209 RTL8CO15255 209 aa2.56□□□□□ -2
CD44-213ENST00000525209 ACYP1P07311 99 aa2.56□□□□□ -2
CD44-213ENST00000525209 SMIM11AP58511 58 aa2.56□□□□□ -2
CD44-213ENST00000525209 DSCR10P59022 87 aa2.56□□□□□ -2
CD44-213ENST00000525209 GNGT1P63211 74 aa2.56□□□□□ -2
CD44-213ENST00000525209 ELOBQ15370 118 aa2.56□□□□□ -2
CD44-213ENST00000525209 C10orf128Q5T292 105 aa2.56□□□□□ -2
CD44-213ENST00000525209 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CD44-213ENST00000525209 C4orf3Q8WVX3 66 aa2.56□□□□□ -2
CD44-213ENST00000525209 DMAC1Q96GE9 116 aa2.56□□□□□ -2
CD44-213ENST00000525209 LRBAP50851 2863 aa2.56□□□□□ -2
CD44-213ENST00000525209 FBN2P35556 2912 aa2.56□□□□□ -2
CD44-213ENST00000525209 ABCA4P78363 2273 aa2.56□□□□□ -2
CD44-213ENST00000525209 NUPR2A6NF83 97 aa2.55□□□□□ -2
CD44-213ENST00000525209 SEC16AO15027 2179 aa2.55□□□□□ -2
CD44-213ENST00000525209 EDDM3BP56851 147 aa2.55□□□□□ -2
CD44-213ENST00000525209 DEFB134Q4QY38 66 aa2.55□□□□□ -2
CD44-213ENST00000525209 LINC00643Q86TS7 51 aa2.55□□□□□ -2
CD44-213ENST00000525209 FAM223AQ8IWN6 122 aa2.55□□□□□ -2
CD44-213ENST00000525209 Q8N9L7 120 aa2.55□□□□□ -2
CD44-213ENST00000525209 CCDC168Q8NDH2 2452 aa2.55□□□□□ -2
CD44-213ENST00000525209 LIMD2Q9BT23 127 aa2.55□□□□□ -2
CD44-213ENST00000525209 ORMDL1Q9P0S3 153 aa2.55□□□□□ -2
CD44-213ENST00000525209 A0A087WWC5 75 aa2.54□□□□□ -2
CD44-213ENST00000525209 A0A0J9YY99 117 aa2.54□□□□□ -2
CD44-213ENST00000525209 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
CD44-213ENST00000525209 A8MU10 97 aa2.54□□□□□ -2
CD44-213ENST00000525209 COX6CP09669 75 aa2.54□□□□□ -2
CD44-213ENST00000525209 TMEM170BQ5T4T1 132 aa2.54□□□□□ -2
CD44-213ENST00000525209 PRR34Q9NV39 138 aa2.54□□□□□ -2
CD44-213ENST00000525209 MRPL36Q9P0J6 103 aaKnown RBP2.54□□□□□ -2
CD44-213ENST00000525209 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
CD44-213ENST00000525209 AKAP6Q13023 2319 aa2.54□□□□□ -2
CD44-213ENST00000525209 MTORP42345 2549 aa2.53□□□□□ -2
CD44-213ENST00000525209 CELSR1Q9NYQ6 3014 aa2.53□□□□□ -2
CD44-213ENST00000525209 MED12LQ86YW9 2145 aa2.53□□□□□ -2
CD44-213ENST00000525209 TRBV25-1A0A075B6N4 114 aa2.53□□□□□ -2
CD44-213ENST00000525209 CHKB-CPT1BH3BT56 60 aa2.53□□□□□ -2
CD44-213ENST00000525209 TPRXLQ17RH7 258 aa2.53□□□□□ -2
CD44-213ENST00000525209 KRTAP21-3Q3LHN1 58 aa2.53□□□□□ -2
CD44-213ENST00000525209 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
CD44-213ENST00000525209 CDC42SE2Q9NRR3 84 aa2.53□□□□□ -2
CD44-213ENST00000525209 ADGRG4Q8IZF6 3080 aa2.53□□□□□ -2
CD44-213ENST00000525209 SPG11Q96JI7 2443 aa2.53□□□□□ -2
CD44-213ENST00000525209 HEATR1Q9H583 2144 aaKnown RBP2.53□□□□□ -2.01
CD44-213ENST00000525209 IGKV3-7A0A075B6H7 116 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 CLPSL1A2RUU4 121 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 C7orf77A4D0Y5 90 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms