RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 SMR3AQ99954 134 aa12.77□□□□□ -0.37
PCDHB18P-201ENST00000524813 C2CD3Q4AC94 2353 aa12.76□□□□□ -0.37
PCDHB18P-201ENST00000524813 TRAV25A0A0B4J276 109 aa12.76□□□□□ -0.37
PCDHB18P-201ENST00000524813 A0A1B0GX51 115 aa12.76□□□□□ -0.37
PCDHB18P-201ENST00000524813 NF1P21359 2839 aa12.75□□□□□ -0.37
PCDHB18P-201ENST00000524813 A0A087WVE0 104 aa12.74□□□□□ -0.37
PCDHB18P-201ENST00000524813 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
PCDHB18P-201ENST00000524813 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
PCDHB18P-201ENST00000524813 CYSTM1Q9H1C7 97 aa12.74□□□□□ -0.37
PCDHB18P-201ENST00000524813 A0A087WZ39 114 aa12.73□□□□□ -0.37
PCDHB18P-201ENST00000524813 J3KT08 172 aa12.73□□□□□ -0.37
PCDHB18P-201ENST00000524813 TRGV4A0A0C4DH28 118 aa12.73□□□□□ -0.37
PCDHB18P-201ENST00000524813 MTORP42345 2549 aa12.73□□□□□ -0.37
PCDHB18P-201ENST00000524813 A0A1W2PRX2 142 aa12.72□□□□□ -0.37
PCDHB18P-201ENST00000524813 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
PCDHB18P-201ENST00000524813 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
PCDHB18P-201ENST00000524813 C11orf44Q8N8P7 122 aa12.72□□□□□ -0.37
PCDHB18P-201ENST00000524813 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
PCDHB18P-201ENST00000524813 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
PCDHB18P-201ENST00000524813 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
PCDHB18P-201ENST00000524813 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.38
PCDHB18P-201ENST00000524813 ORMDL1Q9P0S3 153 aa12.71□□□□□ -0.38
PCDHB18P-201ENST00000524813 OTOGQ6ZRI0 2925 aa12.7□□□□□ -0.38
PCDHB18P-201ENST00000524813 SS18Q15532 418 aa12.7□□□□□ -0.38
PCDHB18P-201ENST00000524813 SERP2Q8N6R1 65 aa12.7□□□□□ -0.38
PCDHB18P-201ENST00000524813 LY6G6DO95868 133 aa12.69□□□□□ -0.38
PCDHB18P-201ENST00000524813 C6orf226Q5I0X4 101 aa12.69□□□□□ -0.38
PCDHB18P-201ENST00000524813 ESM1Q9NQ30 184 aa12.69□□□□□ -0.38
PCDHB18P-201ENST00000524813 ANK3Q12955 4377 aaKnown RBP12.69□□□□□ -0.38
PCDHB18P-201ENST00000524813 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
PCDHB18P-201ENST00000524813 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 LINC00959A0A1B0GUT2 108 aa12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 CCKP06307 115 aa12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 FAM19A5Q7Z5A7 132 aaPredicted RBP12.67□□□□□ -0.38
PCDHB18P-201ENST00000524813 CCL24O00175 119 aa12.66□□□□□ -0.38
PCDHB18P-201ENST00000524813 FHL2Q14192 279 aa12.66□□□□□ -0.38
PCDHB18P-201ENST00000524813 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
PCDHB18P-201ENST00000524813 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
PCDHB18P-201ENST00000524813 HIVEP2P31629 2446 aa12.65□□□□□ -0.38
PCDHB18P-201ENST00000524813 RPS28P62857 69 aaKnown RBP12.65□□□□□ -0.38
PCDHB18P-201ENST00000524813 TMEM86BQ8N661 226 aa12.65□□□□□ -0.38
PCDHB18P-201ENST00000524813 XCL1P47992 114 aa12.64□□□□□ -0.39
PCDHB18P-201ENST00000524813 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
PCDHB18P-201ENST00000524813 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
PCDHB18P-201ENST00000524813 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
PCDHB18P-201ENST00000524813 TMEM258P61165 79 aa12.62□□□□□ -0.39
PCDHB18P-201ENST00000524813 PRR3P79522 188 aaKnown RBP12.62□□□□□ -0.39
PCDHB18P-201ENST00000524813 KIR2DL5BQ8NHK3 375 aa12.62□□□□□ -0.39
PCDHB18P-201ENST00000524813 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
PCDHB18P-201ENST00000524813 Q8N814 137 aa12.61□□□□□ -0.39
PCDHB18P-201ENST00000524813 CSNK1G2-AS1Q8NCQ2 148 aa12.61□□□□□ -0.39
PCDHB18P-201ENST00000524813 HILS1P60008 231 aa12.61□□□□□ -0.39
PCDHB18P-201ENST00000524813 JMJD7-PLA2G4BH0Y9G9 81 aa12.6□□□□□ -0.39
PCDHB18P-201ENST00000524813 DPH3Q96FX2 82 aa12.6□□□□□ -0.39
PCDHB18P-201ENST00000524813 Q8IZM0 81 aa12.59□□□□□ -0.39
PCDHB18P-201ENST00000524813 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
PCDHB18P-201ENST00000524813 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
PCDHB18P-201ENST00000524813 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
PCDHB18P-201ENST00000524813 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.4
PCDHB18P-201ENST00000524813 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
PCDHB18P-201ENST00000524813 FLNBO75369 2602 aaKnown RBP12.58□□□□□ -0.4
PCDHB18P-201ENST00000524813 TMEM256-PLSCR3K7ERE1 68 aa12.57□□□□□ -0.4
PCDHB18P-201ENST00000524813 INAFM1C9JVW0 142 aa12.57□□□□□ -0.4
PCDHB18P-201ENST00000524813 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
PCDHB18P-201ENST00000524813 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
PCDHB18P-201ENST00000524813 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
PCDHB18P-201ENST00000524813 RNASE1P07998 156 aaKnown RBP12.56□□□□□ -0.4
PCDHB18P-201ENST00000524813 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
PCDHB18P-201ENST00000524813 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 JMJD1CQ15652 2540 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 HIVEP1P15822 2718 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 GHRHP01286 108 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 C5orf47Q569G3 176 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 FAM19A1Q7Z5A9 133 aa12.55□□□□□ -0.4
PCDHB18P-201ENST00000524813 GYPEP15421 78 aa12.54□□□□□ -0.4
PCDHB18P-201ENST00000524813 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
PCDHB18P-201ENST00000524813 SETXQ7Z333 2677 aaKnown RBP12.54□□□□□ -0.4
PCDHB18P-201ENST00000524813 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
PCDHB18P-201ENST00000524813 A0A1B0GUV1 79 aa12.52□□□□□ -0.4
PCDHB18P-201ENST00000524813 NDUFC2O95298 119 aa12.52□□□□□ -0.41
PCDHB18P-201ENST00000524813 OXTP01178 125 aa12.52□□□□□ -0.41
PCDHB18P-201ENST00000524813 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
PCDHB18P-201ENST00000524813 LINC01006Q8NI28 216 aa12.51□□□□□ -0.41
PCDHB18P-201ENST00000524813 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 A0A096LPF7 62 aa12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 KIAA0087Q14695 138 aa12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
PCDHB18P-201ENST00000524813 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
PCDHB18P-201ENST00000524813 COX17Q14061 63 aa12.49□□□□□ -0.41
PCDHB18P-201ENST00000524813 Q8NDZ9 215 aa12.48□□□□□ -0.41
PCDHB18P-201ENST00000524813 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
PCDHB18P-201ENST00000524813 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
PCDHB18P-201ENST00000524813 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
PCDHB18P-201ENST00000524813 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
PCDHB18P-201ENST00000524813 LINC00575Q6W349 94 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms