RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 IGLV1-47P01700 117 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 LINC00322Q6ZN03 302 aaPredicted RBP4.33□□□□□ -1.72
SDC2-208ENST00000523877 Q8N9W7 124 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
SDC2-208ENST00000523877 HIGD2AQ9BW72 106 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 CEP295Q9C0D2 2601 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 ARFGEF3Q5TH69 2177 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 NBEAQ8NFP9 2946 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 SPTBN2O15020 2390 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 CNBPP62633 177 aaKnown RBP4.32□□□□□ -1.72
SDC2-208ENST00000523877 DEFB114Q30KQ6 69 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 SMIM29Q86T20 159 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 Q8TAT8 98 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 LITAFQ99732 161 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 PLAC8Q9NZF1 115 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 CEP192Q8TEP8 1941 aa4.32□□□□□ -1.72
SDC2-208ENST00000523877 USP9XQ93008 2570 aaPredicted RBP4.32□□□□□ -1.72
SDC2-208ENST00000523877 TNRC6BQ9UPQ9 1833 aaKnown RBP4.32□□□□□ -1.72
SDC2-208ENST00000523877 NOTCH4Q99466 2003 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 CLPSL1A2RUU4 121 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 H3BPC8 53 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
SDC2-208ENST00000523877 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 WFDC10AQ9H1F0 79 aa4.31□□□□□ -1.72
SDC2-208ENST00000523877 ESPL1Q14674 2120 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 IGKV3D-15A0A087WSY6 115 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 SMIM1B2RUZ4 78 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 H0Y9P7 68 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 HAMPP81172 84 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 DEFB103AP81534 67 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 Q6ZR54 194 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 MIR7-3HGQ8N6C7 128 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 KLK15Q9H2R5 256 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 KLK9Q9UKQ9 250 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 ZNF407Q9C0G0 2248 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 PI4KAP42356 2102 aa4.3□□□□□ -1.72
SDC2-208ENST00000523877 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 IGHV3-64DA0A0J9YX35 117 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 C17orf98A8MV24 154 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 LINC00483Q53H64 154 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 Q6ZSN1 163 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 Q9Y3F1 56 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 ARHGAP32A7KAX9 2087 aa4.29□□□□□ -1.72
SDC2-208ENST00000523877 PRRC2AP48634 2157 aaKnown RBP4.29□□□□□ -1.72
SDC2-208ENST00000523877 IGSF10Q6WRI0 2623 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 IGHV1-18A0A0C4DH31 117 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 NCR3O14931 201 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 LINC01565O15544 149 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 PLA2G2AP14555 144 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 ERHP84090 104 aaKnown RBP4.28□□□□□ -1.72
SDC2-208ENST00000523877 C1orf137Q5JT78 98 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 HCP5Q6MZN7 132 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 ADAMTS20P59510 1910 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 FREM3P0C091 2139 aa4.28□□□□□ -1.72
SDC2-208ENST00000523877 DSPP15924 2871 aaKnown RBP4.28□□□□□ -1.73
SDC2-208ENST00000523877 IGF2RP11717 2491 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 NDPQ00604 133 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 DEFB113Q30KQ7 82 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 GAFA1Q96PS6 74 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 TTTY12Q9BZ98 90 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 PTPN13Q12923 2485 aa4.27□□□□□ -1.73
SDC2-208ENST00000523877 DMXL2Q8TDJ6 3036 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 FREM2Q5SZK8 3169 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.26□□□□□ -1.73
SDC2-208ENST00000523877 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 NDUFA4O00483 81 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 IGKV1-17P01599 117 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 RPS27P42677 84 aaKnown RBP4.26□□□□□ -1.73
SDC2-208ENST00000523877 LINC01006Q8NI28 216 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 MED12Q93074 2177 aa4.26□□□□□ -1.73
SDC2-208ENST00000523877 LAMA5O15230 3695 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 CNOT1A5YKK6 2376 aaKnown RBP4.25□□□□□ -1.73
SDC2-208ENST00000523877 IGKV1D-37A0A075B6S9 117 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 MGPP08493 103 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 P0C880 135 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 SLURP1P55000 103 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
SDC2-208ENST00000523877 HECTD1Q9ULT8 2610 aa4.25□□□□□ -1.73
SDC2-208ENST00000523877 MYO9AB2RTY4 2548 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 IGKV1OR2-108A0A075B7D4 117 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 ODF3BA8MYP8 253 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 J3QKU1 62 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 IGLV3-1P01715 115 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 NTM-AS1Q6ZSK4 140 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 LINC00308Q8TCZ7 52 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms