RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
SMARCE1P4-201ENST00000523647 PIK3C2BO00750 1634 aa2.11□□□□□ -2.07
SMARCE1P4-201ENST00000523647 NHSL1Q5SYE7 1610 aa2.11□□□□□ -2.07
SMARCE1P4-201ENST00000523647 S100A3P33764 101 aa2.11□□□□□ -2.07
SMARCE1P4-201ENST00000523647 RALGAPBQ86X10 1494 aa2.11□□□□□ -2.07
SMARCE1P4-201ENST00000523647 FXYD6-FXYD2A0A087WZ82 144 aa2.1□□□□□ -2.07
SMARCE1P4-201ENST00000523647 H3BVH4 76 aa2.1□□□□□ -2.07
SMARCE1P4-201ENST00000523647 SDK1Q7Z5N4 2213 aa2.1□□□□□ -2.07
SMARCE1P4-201ENST00000523647 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
SMARCE1P4-201ENST00000523647 XRN1Q8IZH2 1706 aaKnown RBP2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 J3QRE1 110 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 IFI6P09912 130 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 DEFB103AP81534 67 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 C10orf113Q5VZT2 155 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
SMARCE1P4-201ENST00000523647 DIP2AQ14689 1571 aa2.09□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PAPPAQ13219 1627 aa2.09□□□□□ -2.08
SMARCE1P4-201ENST00000523647 LRP6O75581 1613 aa2.08□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ANKRD50Q9ULJ7 1429 aa2.08□□□□□ -2.08
SMARCE1P4-201ENST00000523647 MAP2P11137 1827 aaKnown RBP2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 GLI2P10070 1586 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 SAMD9Q5K651 1589 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 USP32Q8NFA0 1604 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 RNF17Q9BXT8 1623 aaKnown RBP2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 TRBV30A0A0K0K1B3 111 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 NDUFB1O75438 58 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ATXN8Q156A1 80 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PCOTHQ58A44 107 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 BRD3OSQ6XYD6 125 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 DNAJC13O75165 2243 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ANKRD36A6QL64 1941 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
SMARCE1P4-201ENST00000523647 NCOA6Q14686 2063 aaPredicted RBP2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PLCH1Q4KWH8 1693 aa2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 Q6ZRX8 168 aa2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 GNG13Q9P2W3 67 aa2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 C5P01031 1676 aa2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 NHSQ6T4R5 1651 aa2.06□□□□□ -2.08
SMARCE1P4-201ENST00000523647 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 CACNA1GO43497 2377 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 LCE6AA0A183 80 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 G3V318 75 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 LINC00575Q6W349 94 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 SMIM11BQ8TCY0 68 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 FANCD2Q9BXW9 1451 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 CICQ96RK0 1608 aaPredicted RBP2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ZNF831Q5JPB2 1677 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PREX1Q8TCU6 1659 aa2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 INTS1Q8N201 2190 aaKnown RBP2.05□□□□□ -2.08
SMARCE1P4-201ENST00000523647 TRAV21A0A0B4J279 112 aa2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 E9PCH4 1651 aa2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 PKD1L3Q7Z443 1732 aa2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ITSN2Q9NZM3 1697 aa2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 MAST1Q9Y2H9 1570 aa2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 KMT2BQ9UMN6 2715 aaPredicted RBP2.04□□□□□ -2.08
SMARCE1P4-201ENST00000523647 MED13LQ71F56 2210 aa2.03□□□□□ -2.08
SMARCE1P4-201ENST00000523647 WIZO95785 1651 aa2.03□□□□□ -2.08
SMARCE1P4-201ENST00000523647 CLASP1Q7Z460 1538 aa2.03□□□□□ -2.08
SMARCE1P4-201ENST00000523647 SPINK13Q1W4C9 94 aa2.03□□□□□ -2.08
SMARCE1P4-201ENST00000523647 ALS2Q96Q42 1657 aa2.02□□□□□ -2.09
SMARCE1P4-201ENST00000523647 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
SMARCE1P4-201ENST00000523647 PARP4Q9UKK3 1724 aaKnown RBP2.02□□□□□ -2.09
SMARCE1P4-201ENST00000523647 TRBV6-1A0A0K0K1D8 114 aa2.01□□□□□ -2.09
SMARCE1P4-201ENST00000523647 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
SMARCE1P4-201ENST00000523647 FAM103A1Q9BTL3 118 aaKnown RBP2.01□□□□□ -2.09
SMARCE1P4-201ENST00000523647 PAPPA2Q9BXP8 1791 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 TIAM2Q8IVF5 1701 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 MROH2AA6NES4 1674 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 NCR3O14931 201 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 PIN1P1O15428 100 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 PRB1P04280 392 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 RPL37P61927 97 aaKnown RBP2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 NREPQ16612 68 aa2□□□□□ -2.09
SMARCE1P4-201ENST00000523647 EIF2AK4Q9P2K8 1649 aaKnown RBP1.99□□□□□ -2.09
SMARCE1P4-201ENST00000523647 UBR3Q6ZT12 1888 aa1.99□□□□□ -2.09
SMARCE1P4-201ENST00000523647 A0A0D9SFI3 127 aa1.99□□□□□ -2.09
SMARCE1P4-201ENST00000523647 BCORQ6W2J9 1755 aa1.98□□□□□ -2.09
SMARCE1P4-201ENST00000523647 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
SMARCE1P4-201ENST00000523647 A0A1B0GU69 56 aa1.98□□□□□ -2.09
SMARCE1P4-201ENST00000523647 LINC01549A6NIU2 74 aa1.98□□□□□ -2.09
SMARCE1P4-201ENST00000523647 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
SMARCE1P4-201ENST00000523647 LRRC7Q96NW7 1537 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 CFAP43Q8NDM7 1665 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 MYO7AQ13402 2215 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 SNRPGP15A8MWD9 76 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 LY6G6CO95867 125 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 WFDC9Q8NEX5 89 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 GAFA1Q96PS6 74 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 COL14A1Q05707 1796 aaKnown RBP1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 RICTORQ6R327 1708 aa1.97□□□□□ -2.09
SMARCE1P4-201ENST00000523647 TSC2P49815 1807 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 ABCA1O95477 2261 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 HAMPP81172 84 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 SLIT1O75093 1534 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 ABCC6O95255 1503 aa1.96□□□□□ -2.1
SMARCE1P4-201ENST00000523647 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms