RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PDE6HQ13956 83 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 C10orf55Q5SWW7 151 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 MINOS1Q5TGZ0 78 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 NPBQ8NG41 125 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 Q9H3A6 140 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 MINOS1-NBL1R4GNA1 71 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 KRTAP4-16G5E9R7 235 aaPredicted RBP3.49□□□□□ -1.85
PABPC1-223ENST00000523636 FUSP35637 526 aaKnown RBP eCLIP3.49□□□□□ -1.85
PABPC1-223ENST00000523636 NMUP48645 174 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 MPV17L2Q567V2 206 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 LINC00479Q96M42 142 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 SHANK2-AS3Q9BTD1 123 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 TP53TG3Q9ULZ0 132 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 HILPDAQ9Y5L2 63 aa3.49□□□□□ -1.85
PABPC1-223ENST00000523636 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 A0A1B0GUT8 65 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 C19orf71A6NCJ1 209 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 SNCGO76070 127 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 NDUFA3O95167 84 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 LEPROTL1O95214 131 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 CD7P09564 240 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 Q56UQ5 140 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 C21orf62Q9NYP8 219 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 MRPL36Q9P0J6 103 aaKnown RBP3.48□□□□□ -1.85
PABPC1-223ENST00000523636 DHRS4-AS1Q9P1J3 65 aa3.48□□□□□ -1.85
PABPC1-223ENST00000523636 IGHV3-21A0A0B4J1V1 117 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 MUC21A0A0G2JKD1 596 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 MUC21A0A140T8X8 626 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 H3BRN7 92 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 TMEM256-PLSCR3K7ERE1 68 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 IL4P05112 153 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 C3orf79P0CE67 100 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 MT3P25713 68 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 HLA-DMBP28068 263 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 EBI3Q14213 229 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 SCXQ7RTU7 201 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 PHF5AQ7RTV0 110 aaKnown RBP3.47□□□□□ -1.85
PABPC1-223ENST00000523636 Q86TA4 180 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 C10orf126Q8N4M7 172 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 SLC25A29Q8N8R3 303 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 PPDPFLQ8WWR9 84 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 ZNF414Q96IQ9 312 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 MOB4Q9Y3A3 225 aa3.47□□□□□ -1.85
PABPC1-223ENST00000523636 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 F2Z2F3 143 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 K7EIM0 57 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 IGKV1-17P01599 117 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 APELAP0DMC3 54 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 HLA-DRB4P13762 266 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 C9orf153Q5TBE3 101 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 PCP2Q8IVA1 136 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 C5orf56Q8N8D9 126 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 GTSF1Q8WW33 167 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 AGPAT4-IT1Q9H0P7 198 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 HLA-DRB4X5D2U9 266 aa3.46□□□□□ -1.86
PABPC1-223ENST00000523636 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 TRAV12-2A0A075B6T6 113 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 A0A087WYN8 130 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 TRBV7-1A0A0A6YYK4 115 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 TRBV7-7A0A0K0K1E9 115 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 C2orf70A6NJV1 201 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 TRACP01848 142 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 PRM2P04554 102 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 ZNF688P0C7X2 276 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-223ENST00000523636 CXCL6P80162 114 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 KLK9Q2XQG4 91 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 ZNF876PQ49A33 203 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 GDF5OSQ5U4N7 250 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 LINC01545Q5VT33 79 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 C15orf53Q8NAA6 179 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 OR8A1Q8NGG7 326 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 PRELID3AQ96N28 172 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 C20orf78Q9BR46 151 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 SLC50A1Q9BRV3 221 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 KLK9Q9UKQ9 250 aa3.45□□□□□ -1.86
PABPC1-223ENST00000523636 IGLV8-61A0A075B6I0 122 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 IGHV1-24A0A0C4DH33 117 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 RBAKDNA6NC62 111 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 H3BUT2 72 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 CKS2P33552 79 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 CXCL5P42830 114 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 DEFB135Q30KP9 77 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 C2orf66Q6UXQ4 117 aa3.44□□□□□ -1.86
PABPC1-223ENST00000523636 ORMDL3Q8N138 153 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms