RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 Q8IZM0 81 aa15.17■□□□□ 0.02
PVT1-219ENST00000523427 KRTAP9-6A0A140TA67 174 aa15.16■□□□□ 0.02
PVT1-219ENST00000523427 GAGE10A6NGK3 116 aa15.16■□□□□ 0.02
PVT1-219ENST00000523427 MAP1LC3AQ9H492 121 aa15.16■□□□□ 0.02
PVT1-219ENST00000523427 AMELXQ99217 191 aa15.15■□□□□ 0.02
PVT1-219ENST00000523427 LINC00167Q96N53 147 aa15.14■□□□□ 0.01
PVT1-219ENST00000523427 TP73-AS1Q9UF72 201 aa15.14■□□□□ 0.01
PVT1-219ENST00000523427 F8VRH5 84 aa15.13■□□□□ 0.01
PVT1-219ENST00000523427 CDIP1Q9H305 208 aa15.13■□□□□ 0.01
PVT1-219ENST00000523427 CDKN2A-AS1Q9UH64 79 aa15.13■□□□□ 0.01
PVT1-219ENST00000523427 PEA15Q15121 130 aa15.12■□□□□ 0.01
PVT1-219ENST00000523427 KRTAP13-2Q52LG2 175 aa15.12■□□□□ 0.01
PVT1-219ENST00000523427 Q8N8P6 123 aa15.11■□□□□ 0.01
PVT1-219ENST00000523427 UBE2AP49459 152 aa15.1■□□□□ 0.01
PVT1-219ENST00000523427 GEMIN7Q9H840 131 aaKnown RBP15.1■□□□□ 0.01
PVT1-219ENST00000523427 ATP5L2Q7Z4Y8 100 aa15.09■□□□□ 0.01
PVT1-219ENST00000523427 PRSS47A8MTI9 375 aa15.08■□□□□ 0
PVT1-219ENST00000523427 HERVK_113P63121 156 aa15.08■□□□□ 0
PVT1-219ENST00000523427 LINC00304Q8N9R0 145 aa15.08■□□□□ 0
PVT1-219ENST00000523427 IGIPA6NJ69 53 aa15.07■□□□□ 0
PVT1-219ENST00000523427 ORMDL2Q53FV1 153 aa15.06■□□□□ 0
PVT1-219ENST00000523427 LAMTOR2Q9Y2Q5 125 aa15.06■□□□□ 0
PVT1-219ENST00000523427 RAB5BP61020 215 aa15.05■□□□□ -0
PVT1-219ENST00000523427 FAM19A3Q7Z5A8 133 aa15.05■□□□□ -0
PVT1-219ENST00000523427 IGLV7-46A0A075B6I9 117 aa15.04■□□□□ -0
PVT1-219ENST00000523427 SEC11AP67812 179 aa15.04■□□□□ -0
PVT1-219ENST00000523427 IGKV2D-26A0A0A0MRZ7 120 aa15.02■□□□□ -0
PVT1-219ENST00000523427 CXCL5P42830 114 aa15.02■□□□□ -0
PVT1-219ENST00000523427 NKAPP1Q8N9T2 125 aa15.02■□□□□ -0
PVT1-219ENST00000523427 SCO1O75880 301 aa15.01□□□□□ -0.01
PVT1-219ENST00000523427 NPSP0C0P6 89 aa15□□□□□ -0.01
PVT1-219ENST00000523427 PNRC1Q12796 327 aaPredicted RBP15□□□□□ -0.01
PVT1-219ENST00000523427 PAPPA-AS1Q5QFB9 102 aa15□□□□□ -0.01
PVT1-219ENST00000523427 KRTAP13-1Q8IUC0 172 aa15□□□□□ -0.01
PVT1-219ENST00000523427 IGKV2-28A0A075B6P5 120 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 IGKV2D-28P01615 120 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 TPRXLQ17RH7 258 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 FAM229BQ4G0N7 80 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 COX7B2Q8TF08 81 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 MUC17Q685J3 4493 aa14.99□□□□□ -0.01
PVT1-219ENST00000523427 SMIM1B2RUZ4 78 aa14.98□□□□□ -0.01
PVT1-219ENST00000523427 PRLHP81277 87 aa14.97□□□□□ -0.01
PVT1-219ENST00000523427 NXT2Q9NPJ8 142 aaKnown RBP14.95□□□□□ -0.02
PVT1-219ENST00000523427 IGLV5-37A0A075B6J1 123 aa14.94□□□□□ -0.02
PVT1-219ENST00000523427 K7EMI3 77 aa14.94□□□□□ -0.02
PVT1-219ENST00000523427 PDZD11Q5EBL8 140 aa14.94□□□□□ -0.02
PVT1-219ENST00000523427 TIMM17AQ99595 171 aa14.94□□□□□ -0.02
PVT1-219ENST00000523427 SPINK8P0C7L1 97 aa14.93□□□□□ -0.02
PVT1-219ENST00000523427 SCGB3A1Q96QR1 104 aa14.93□□□□□ -0.02
PVT1-219ENST00000523427 FAM19A1Q7Z5A9 133 aa14.92□□□□□ -0.02
PVT1-219ENST00000523427 TOMM6Q96B49 74 aa14.92□□□□□ -0.02
PVT1-219ENST00000523427 PPDPFQ9H3Y8 114 aa14.92□□□□□ -0.02
PVT1-219ENST00000523427 G0S2P27469 103 aa14.91□□□□□ -0.02
PVT1-219ENST00000523427 ADCYAP1P18509 176 aa14.9□□□□□ -0.02
PVT1-219ENST00000523427 TMEM238C9JI98 176 aa14.89□□□□□ -0.03
PVT1-219ENST00000523427 C3orf22Q8N5N4 141 aa14.89□□□□□ -0.03
PVT1-219ENST00000523427 TINCRA0A1B0GVN0 87 aa14.88□□□□□ -0.03
PVT1-219ENST00000523427 PFN2P35080 140 aa14.88□□□□□ -0.03
PVT1-219ENST00000523427 ERASQ7Z444 233 aa14.88□□□□□ -0.03
PVT1-219ENST00000523427 KIAA1644Q3SXP7 199 aa14.87□□□□□ -0.03
PVT1-219ENST00000523427 MT-ND4LP03901 98 aa14.86□□□□□ -0.03
PVT1-219ENST00000523427 ATP5LO75964 103 aa14.85□□□□□ -0.03
PVT1-219ENST00000523427 ANAPC16Q96DE5 110 aa14.85□□□□□ -0.03
PVT1-219ENST00000523427 TMEM126AQ9H061 195 aa14.85□□□□□ -0.03
PVT1-219ENST00000523427 IGLV5-45A0A087WSX0 123 aa14.84□□□□□ -0.03
PVT1-219ENST00000523427 PLEKHB2Q96CS7 222 aa14.82□□□□□ -0.04
PVT1-219ENST00000523427 CST9LQ9H4G1 147 aa14.82□□□□□ -0.04
PVT1-219ENST00000523427 CBLN2Q8IUK8 224 aa14.81□□□□□ -0.04
PVT1-219ENST00000523427 VPREB1P12018 145 aa14.8□□□□□ -0.04
PVT1-219ENST00000523427 HIGD2AQ9BW72 106 aa14.8□□□□□ -0.04
PVT1-219ENST00000523427 RAB14P61106 215 aa14.79□□□□□ -0.04
PVT1-219ENST00000523427 LINC00337Q8N6G1 96 aa14.79□□□□□ -0.04
PVT1-219ENST00000523427 M0R378 163 aa14.78□□□□□ -0.04
PVT1-219ENST00000523427 SND1-IT1Q9HBX3 110 aa14.78□□□□□ -0.04
PVT1-219ENST00000523427 H3BRM9 83 aa14.76□□□□□ -0.05
PVT1-219ENST00000523427 CTAG1AP78358 180 aa14.76□□□□□ -0.05
PVT1-219ENST00000523427 PMVKQ15126 192 aa14.76□□□□□ -0.05
PVT1-219ENST00000523427 MRPL18Q9H0U6 180 aaKnown RBP14.76□□□□□ -0.05
PVT1-219ENST00000523427 A0A1B0GVG6 124 aa14.75□□□□□ -0.05
PVT1-219ENST00000523427 RPL24P83731 157 aaKnown RBP14.75□□□□□ -0.05
PVT1-219ENST00000523427 C4orf48Q5BLP8 95 aa14.75□□□□□ -0.05
PVT1-219ENST00000523427 ZNF625Q96I27 306 aaPredicted RBP14.75□□□□□ -0.05
PVT1-219ENST00000523427 SPAG11AQ6PDA7 123 aa14.74□□□□□ -0.05
PVT1-219ENST00000523427 ERG28Q9UKR5 140 aa14.74□□□□□ -0.05
PVT1-219ENST00000523427 LINC01547P58512 204 aaPredicted RBP14.73□□□□□ -0.05
PVT1-219ENST00000523427 Q8NDZ9 215 aa14.73□□□□□ -0.05
PVT1-219ENST00000523427 NDUFA6P56556 154 aa14.71□□□□□ -0.05
PVT1-219ENST00000523427 DAND5Q8N907 189 aa14.71□□□□□ -0.05
PVT1-219ENST00000523427 GNB1LQ9BYB4 327 aa14.7□□□□□ -0.06
PVT1-219ENST00000523427 FP248Q71RG6 208 aaPredicted RBP14.69□□□□□ -0.06
PVT1-219ENST00000523427 SPRR4Q96PI1 79 aa14.69□□□□□ -0.06
PVT1-219ENST00000523427 IGLV5-39A0A0G2JS06 123 aa14.67□□□□□ -0.06
PVT1-219ENST00000523427 LINC01549A6NIU2 74 aa14.67□□□□□ -0.06
PVT1-219ENST00000523427 KRTAP13-3Q3SY46 172 aa14.67□□□□□ -0.06
PVT1-219ENST00000523427 FA2HQ7L5A8 372 aa14.66□□□□□ -0.06
PVT1-219ENST00000523427 Q8NBF4 154 aa14.66□□□□□ -0.06
PVT1-219ENST00000523427 ASB16-AS1Q495Z4 193 aa14.65□□□□□ -0.06
PVT1-219ENST00000523427 KRTAP4-1Q9BYQ7 146 aa14.65□□□□□ -0.06
PVT1-219ENST00000523427 SMCO4Q9NRQ5 59 aa14.65□□□□□ -0.06
PVT1-219ENST00000523427 IGLC3P0DOY3 106 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms