RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
PVT1-218ENST00000523328 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
PVT1-218ENST00000523328 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
PVT1-218ENST00000523328 LINC00167Q96N53 147 aa13.19□□□□□ -0.3
PVT1-218ENST00000523328 CDIP1Q9H305 208 aa13.19□□□□□ -0.3
PVT1-218ENST00000523328 VCX2Q9H322 139 aa13.19□□□□□ -0.3
PVT1-218ENST00000523328 RPL37AP8A6NKH3 93 aa13.18□□□□□ -0.3
PVT1-218ENST00000523328 F8VRH5 84 aa13.18□□□□□ -0.3
PVT1-218ENST00000523328 KRTAP13-1Q8IUC0 172 aa13.18□□□□□ -0.3
PVT1-218ENST00000523328 CYSLTR1Q9Y271 337 aa13.18□□□□□ -0.3
PVT1-218ENST00000523328 LOC389332A0A1B0GUA5 103 aa13.17□□□□□ -0.3
PVT1-218ENST00000523328 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
PVT1-218ENST00000523328 LINC00304Q8N9R0 145 aa13.17□□□□□ -0.3
PVT1-218ENST00000523328 CDKN2A-AS1Q9UH64 79 aa13.16□□□□□ -0.3
PVT1-218ENST00000523328 IGIPA6NJ69 53 aa13.15□□□□□ -0.3
PVT1-218ENST00000523328 FAM229BQ4G0N7 80 aa13.15□□□□□ -0.3
PVT1-218ENST00000523328 NPSP0C0P6 89 aa13.14□□□□□ -0.31
PVT1-218ENST00000523328 SRSF3P84103 164 aaKnown RBP13.14□□□□□ -0.31
PVT1-218ENST00000523328 ATP5L2Q7Z4Y8 100 aa13.14□□□□□ -0.31
PVT1-218ENST00000523328 MAP1LC3AQ9H492 121 aa13.14□□□□□ -0.31
PVT1-218ENST00000523328 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
PVT1-218ENST00000523328 IGLV7-46A0A075B6I9 117 aa13.13□□□□□ -0.31
PVT1-218ENST00000523328 HERVK_113P63121 156 aa13.13□□□□□ -0.31
PVT1-218ENST00000523328 Q8N8P6 123 aa13.13□□□□□ -0.31
PVT1-218ENST00000523328 GAGE10A6NGK3 116 aa13.12□□□□□ -0.31
PVT1-218ENST00000523328 CXCL5P42830 114 aa13.11□□□□□ -0.31
PVT1-218ENST00000523328 IGLV5-37A0A075B6J1 123 aa13.1□□□□□ -0.31
PVT1-218ENST00000523328 UBE2AP49459 152 aa13.1□□□□□ -0.31
PVT1-218ENST00000523328 SEC11AP67812 179 aa13.1□□□□□ -0.31
PVT1-218ENST00000523328 ORMDL2Q53FV1 153 aa13.09□□□□□ -0.31
PVT1-218ENST00000523328 PNRC1Q12796 327 aaPredicted RBP13.08□□□□□ -0.32
PVT1-218ENST00000523328 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
PVT1-218ENST00000523328 CTAG1AP78358 180 aa13.07□□□□□ -0.32
PVT1-218ENST00000523328 PEA15Q15121 130 aa13.07□□□□□ -0.32
PVT1-218ENST00000523328 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
PVT1-218ENST00000523328 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
PVT1-218ENST00000523328 K7EMI3 77 aa13.05□□□□□ -0.32
PVT1-218ENST00000523328 PAPPA-AS1Q5QFB9 102 aa13.05□□□□□ -0.32
PVT1-218ENST00000523328 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
PVT1-218ENST00000523328 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
PVT1-218ENST00000523328 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
PVT1-218ENST00000523328 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
PVT1-218ENST00000523328 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 IGKV2-28A0A075B6P5 120 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 SCO1O75880 301 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 IGKV2D-28P01615 120 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 PRLHP81277 87 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
PVT1-218ENST00000523328 RAB5BP61020 215 aa13□□□□□ -0.33
PVT1-218ENST00000523328 TOMM6Q96B49 74 aa13□□□□□ -0.33
PVT1-218ENST00000523328 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
PVT1-218ENST00000523328 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
PVT1-218ENST00000523328 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
PVT1-218ENST00000523328 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
PVT1-218ENST00000523328 G0S2P27469 103 aa12.96□□□□□ -0.33
PVT1-218ENST00000523328 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.33
PVT1-218ENST00000523328 ERASQ7Z444 233 aa12.95□□□□□ -0.34
PVT1-218ENST00000523328 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
PVT1-218ENST00000523328 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
PVT1-218ENST00000523328 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
PVT1-218ENST00000523328 SPINK8P0C7L1 97 aa12.94□□□□□ -0.34
PVT1-218ENST00000523328 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
PVT1-218ENST00000523328 VPREB1P12018 145 aa12.92□□□□□ -0.34
PVT1-218ENST00000523328 ADCYAP1P18509 176 aa12.92□□□□□ -0.34
PVT1-218ENST00000523328 SCGB3A1Q96QR1 104 aa12.92□□□□□ -0.34
PVT1-218ENST00000523328 M0R378 163 aa12.91□□□□□ -0.34
PVT1-218ENST00000523328 SPAG11AQ6PDA7 123 aa12.91□□□□□ -0.34
PVT1-218ENST00000523328 FP248Q71RG6 208 aaPredicted RBP12.91□□□□□ -0.34
PVT1-218ENST00000523328 ASB16-AS1Q495Z4 193 aa12.9□□□□□ -0.34
PVT1-218ENST00000523328 ATP5LO75964 103 aa12.89□□□□□ -0.35
PVT1-218ENST00000523328 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
PVT1-218ENST00000523328 ANAPC16Q96DE5 110 aa12.89□□□□□ -0.35
PVT1-218ENST00000523328 KRTAP4-1Q9BYQ7 146 aa12.89□□□□□ -0.35
PVT1-218ENST00000523328 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
PVT1-218ENST00000523328 PFN2P35080 140 aa12.88□□□□□ -0.35
PVT1-218ENST00000523328 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
PVT1-218ENST00000523328 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
PVT1-218ENST00000523328 LINC00337Q8N6G1 96 aa12.86□□□□□ -0.35
PVT1-218ENST00000523328 SND1-IT1Q9HBX3 110 aa12.86□□□□□ -0.35
PVT1-218ENST00000523328 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
PVT1-218ENST00000523328 Q8NDZ9 215 aa12.85□□□□□ -0.35
PVT1-218ENST00000523328 GNB1LQ9BYB4 327 aa12.85□□□□□ -0.35
PVT1-218ENST00000523328 MRPL18Q9H0U6 180 aaKnown RBP12.85□□□□□ -0.35
PVT1-218ENST00000523328 KIAA1644Q3SXP7 199 aa12.84□□□□□ -0.35
PVT1-218ENST00000523328 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
PVT1-218ENST00000523328 CRCT1Q9UGL9 99 aa12.84□□□□□ -0.35
PVT1-218ENST00000523328 SPRR4Q96PI1 79 aa12.83□□□□□ -0.36
PVT1-218ENST00000523328 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
PVT1-218ENST00000523328 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
PVT1-218ENST00000523328 PMVKQ15126 192 aa12.82□□□□□ -0.36
PVT1-218ENST00000523328 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
PVT1-218ENST00000523328 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
PVT1-218ENST00000523328 H3BRM9 83 aa12.81□□□□□ -0.36
PVT1-218ENST00000523328 ERG28Q9UKR5 140 aa12.81□□□□□ -0.36
PVT1-218ENST00000523328 FSIP2Q5CZC0 6907 aa12.81□□□□□ -0.36
PVT1-218ENST00000523328 RAB14P61106 215 aa12.8□□□□□ -0.36
PVT1-218ENST00000523328 C4orf48Q5BLP8 95 aa12.79□□□□□ -0.36
PVT1-218ENST00000523328 COX17Q14061 63 aa12.78□□□□□ -0.36
PVT1-218ENST00000523328 DAND5Q8N907 189 aa12.78□□□□□ -0.36
PVT1-218ENST00000523328 Q8NBF4 154 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms