RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 Q6ZN92 141 aa7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 BORCS7Q96B45 105 aa7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
NKX3-1-202ENST00000523261 ARPC5O15511 151 aa7.49□□□□□ -1.21
NKX3-1-202ENST00000523261 ALKBH7Q9BT30 221 aaPredicted RBP7.49□□□□□ -1.21
NKX3-1-202ENST00000523261 TCAPO15273 167 aa7.48□□□□□ -1.21
NKX3-1-202ENST00000523261 CFC1P0CG37 223 aa7.48□□□□□ -1.21
NKX3-1-202ENST00000523261 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
NKX3-1-202ENST00000523261 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
NKX3-1-202ENST00000523261 IGLV4-3A0A075B6K6 122 aa7.47□□□□□ -1.21
NKX3-1-202ENST00000523261 SLC25A20O43772 301 aa7.47□□□□□ -1.21
NKX3-1-202ENST00000523261 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
NKX3-1-202ENST00000523261 M0R378 163 aa7.46□□□□□ -1.22
NKX3-1-202ENST00000523261 CT83Q5H943 113 aa7.46□□□□□ -1.22
NKX3-1-202ENST00000523261 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
NKX3-1-202ENST00000523261 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
NKX3-1-202ENST00000523261 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
NKX3-1-202ENST00000523261 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
NKX3-1-202ENST00000523261 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
NKX3-1-202ENST00000523261 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
NKX3-1-202ENST00000523261 SMIM2Q9BVW6 85 aa7.44□□□□□ -1.22
NKX3-1-202ENST00000523261 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
NKX3-1-202ENST00000523261 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
NKX3-1-202ENST00000523261 ZC2HC1BQ5TFG8 222 aa7.42□□□□□ -1.22
NKX3-1-202ENST00000523261 EIF5A2Q9GZV4 153 aaKnown RBP7.42□□□□□ -1.22
NKX3-1-202ENST00000523261 ZNF706Q9Y5V0 76 aaPredicted RBP7.42□□□□□ -1.22
NKX3-1-202ENST00000523261 CXCL5P42830 114 aa7.41□□□□□ -1.22
NKX3-1-202ENST00000523261 FAM104BQ5XKR9 115 aa7.41□□□□□ -1.22
NKX3-1-202ENST00000523261 TEX43Q6ZNM6 134 aa7.41□□□□□ -1.22
NKX3-1-202ENST00000523261 NDUFA13Q9P0J0 144 aa7.41□□□□□ -1.22
NKX3-1-202ENST00000523261 LINC00862A6NCI5 91 aa7.4□□□□□ -1.22
NKX3-1-202ENST00000523261 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
NKX3-1-202ENST00000523261 TEX46H3BTG2 121 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 VPREB1P12018 145 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 RIGQ13278 110 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 ZNF345Q14585 488 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
NKX3-1-202ENST00000523261 CKS2P33552 79 aa7.38□□□□□ -1.23
NKX3-1-202ENST00000523261 RAB5BP61020 215 aa7.38□□□□□ -1.23
NKX3-1-202ENST00000523261 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
NKX3-1-202ENST00000523261 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
NKX3-1-202ENST00000523261 AMELXQ99217 191 aa7.37□□□□□ -1.23
NKX3-1-202ENST00000523261 LCE2BO14633 110 aa7.36□□□□□ -1.23
NKX3-1-202ENST00000523261 MOBPQ13875 183 aa7.36□□□□□ -1.23
NKX3-1-202ENST00000523261 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
NKX3-1-202ENST00000523261 LINC01551Q86U37 167 aa7.36□□□□□ -1.23
NKX3-1-202ENST00000523261 NPYP01303 97 aa7.35□□□□□ -1.23
NKX3-1-202ENST00000523261 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
NKX3-1-202ENST00000523261 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
NKX3-1-202ENST00000523261 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
NKX3-1-202ENST00000523261 SMLR1H3BR10 107 aa7.34□□□□□ -1.23
NKX3-1-202ENST00000523261 IGLV9-49A0A0B4J1Y8 123 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 D6R8Y8 96 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 RAB5AP20339 215 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 HERVK_113P63121 156 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 VCX2Q9H322 139 aa7.33□□□□□ -1.24
NKX3-1-202ENST00000523261 KANTRA0A1W2PQU2 76 aa7.32□□□□□ -1.24
NKX3-1-202ENST00000523261 TAGLN2P37802 199 aaKnown RBP7.32□□□□□ -1.24
NKX3-1-202ENST00000523261 Q8NDZ9 215 aa7.32□□□□□ -1.24
NKX3-1-202ENST00000523261 SMCR5Q8TEV8 140 aa7.31□□□□□ -1.24
NKX3-1-202ENST00000523261 OSTCQ9NRP0 149 aa7.31□□□□□ -1.24
NKX3-1-202ENST00000523261 SEC11AP67812 179 aa7.3□□□□□ -1.24
NKX3-1-202ENST00000523261 TMEM250H0YL14 139 aa7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 PDZD11Q5EBL8 140 aa7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 GAGE2AQ6NT46 116 aa7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 SND1-IT1Q9HBX3 110 aa7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 V9GYV3 84 aa7.29□□□□□ -1.24
NKX3-1-202ENST00000523261 AKAP14Q86UN6 197 aa7.28□□□□□ -1.24
NKX3-1-202ENST00000523261 CYSLTR1Q9Y271 337 aa7.28□□□□□ -1.24
NKX3-1-202ENST00000523261 HMSDA8MTL9 139 aa7.27□□□□□ -1.25
NKX3-1-202ENST00000523261 NPSP0C0P6 89 aa7.27□□□□□ -1.25
NKX3-1-202ENST00000523261 PFN2P35080 140 aa7.27□□□□□ -1.25
NKX3-1-202ENST00000523261 RAB14P61106 215 aa7.27□□□□□ -1.25
NKX3-1-202ENST00000523261 NAT8BQ9UHF3 227 aa7.27□□□□□ -1.25
NKX3-1-202ENST00000523261 IGIPA6NJ69 53 aa7.26□□□□□ -1.25
NKX3-1-202ENST00000523261 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
NKX3-1-202ENST00000523261 PPBPP02775 128 aa7.25□□□□□ -1.25
NKX3-1-202ENST00000523261 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
NKX3-1-202ENST00000523261 FAM74A3Q4VXF1 159 aa7.25□□□□□ -1.25
NKX3-1-202ENST00000523261 Q6Q795 121 aa7.25□□□□□ -1.25
NKX3-1-202ENST00000523261 LOC389332A0A1B0GUA5 103 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 A0A1B0GW15 77 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 ATP5LO75964 103 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 MT2AP02795 61 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 CEBPGP53567 150 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
NKX3-1-202ENST00000523261 SMIM7Q9BQ49 75 aa7.23□□□□□ -1.25
NKX3-1-202ENST00000523261 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
NKX3-1-202ENST00000523261 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
NKX3-1-202ENST00000523261 SPRR1AP35321 89 aa7.22□□□□□ -1.25
NKX3-1-202ENST00000523261 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
NKX3-1-202ENST00000523261 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
NKX3-1-202ENST00000523261 NEBP20929 6669 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms