RNA–Protein interactions for RNA: ENST00000523067.5

PTK2-242, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-242	ENST00000523067	HIST1H2BB	P33778	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST1H2BD	P58876	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST1H2BC	P62807	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST2H2BE	Q16778	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	CIRBP-AS1	Q8TBR5	109 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST1H2BH	Q93079	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST1H2BN	Q99877	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	HIST1H2BM	Q99879	126 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	KRTAP4-9	Q9BYQ8	210 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	MRPL35	Q9NZE8	188 aa	Known RBP	4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	LINC00474	Q9P2X8	69 aa		4.93	□□□□□ -1.62
PTK2-242	ENST00000523067	TRAV12-1	A0A0B4J245	112 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	LOC107984640	A0A0U1RRK4	108 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	NUPR1	O60356	82 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	LEPROTL1	O95214	131 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	SMR3B	P02814	79 aa	Predicted RBP	4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	IGLC3	P0DOY3	106 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	LINC00310	P59036	64 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	CKS1B	P61024	79 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	HAMP	P81172	84 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	CIRBP	Q14011	172 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	SCX	Q7RTU7	201 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067		Q8IZM0	81 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	TOMM7	Q9P0U1	55 aa		4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.92	□□□□□ -1.62
PTK2-242	ENST00000523067	TRBV30	A0A0K0K1B3	111 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	SMIM1	B2RUZ4	78 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	EPM2A	B3EWF7	344 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	PANO1	I0J062	215 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	C10orf25	Q5T742	122 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	HSPB8	Q9UJY1	196 aa		4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-242	ENST00000523067	APOB	P04114	4563 aa	Known RBP	4.9	□□□□□ -1.62
PTK2-242	ENST00000523067		A0A087WYN8	130 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	IGKV2-24	A0A0C4DH68	120 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	SPINK8	P0C7L1	97 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	CHTF8	P0CG12	524 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	FABP4	P15090	132 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	ZNF22	P17026	224 aa	Predicted RBP	4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	GAGE2B	Q13066	116 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	MAJIN	Q3KP22	176 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	C2orf82	Q6UX34	121 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	SPACA4	Q8TDM5	124 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	COX7B2	Q8TF08	81 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	PLAC8	Q9NZF1	115 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067	C6orf48	Q9UBA6	75 aa		4.9	□□□□□ -1.63
PTK2-242	ENST00000523067		A0A096LNI7	61 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	C11orf86	A6NJI1	115 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067		F8VRH5	84 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	TLX1NB	P0CAT3	122 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	CXCL5	P42830	114 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	PTTG1IP	P53801	180 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	COA6	Q5JTJ3	125 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	TMEM170B	Q5T4T1	132 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	STPG4	Q8N801	248 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	DNAH8	Q96JB1	4490 aa		4.89	□□□□□ -1.63
PTK2-242	ENST00000523067	IGLV5-39	A0A0G2JS06	123 aa		4.88	□□□□□ -1.63
PTK2-242	ENST00000523067	NDUFC2-KCTD14	E9PQ53	114 aa		4.88	□□□□□ -1.63
PTK2-242	ENST00000523067	KRTAP19-1	Q8IUB9	90 aa		4.88	□□□□□ -1.63
PTK2-242	ENST00000523067	MAP1LC3C	Q9BXW4	147 aa		4.88	□□□□□ -1.63
PTK2-242	ENST00000523067		H0Y8G0	127 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	PLA2G1B	P04054	148 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	RPL18A	Q02543	176 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	ODF1	Q14990	250 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067		Q5VSD8	79 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067		Q6ZRP5	223 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	KRTAP4-5	Q9BYR2	181 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	HSPG2	P98160	4391 aa		4.87	□□□□□ -1.63
PTK2-242	ENST00000523067	TMEM223	A0PJW6	202 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	DPM2	O94777	84 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	PLN	P26678	52 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	GAGE2E	Q4V326	116 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	C9orf116	Q5BN46	136 aa	Predicted RBP	4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	SFTA2	Q6UW10	78 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067	GAGE2D	Q9UEU5	116 aa		4.86	□□□□□ -1.63
PTK2-242	ENST00000523067		A0A1W2PNN7	141 aa		4.85	□□□□□ -1.63
PTK2-242	ENST00000523067	C7orf33	Q8WU49	177 aa		4.85	□□□□□ -1.63
PTK2-242	ENST00000523067	FAT1	Q14517	4588 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067		H3BS24	57 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	SYS1-DBNDD2	H3BUS1	97 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	IGKC	P01834	107 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	INAFM2	P0DMQ5	153 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	RPL37A	P61513	92 aa	Known RBP	4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	KRTAP5-3	Q6L8H2	238 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	PET117	Q6UWS5	81 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	PMCHL2	Q9BQD1	86 aa		4.84	□□□□□ -1.63
PTK2-242	ENST00000523067	HERVK_113	P61574	105 aa		4.83	□□□□□ -1.64
PTK2-242	ENST00000523067	ZNF625	Q96I27	306 aa	Predicted RBP	4.83	□□□□□ -1.64
PTK2-242	ENST00000523067	S100A6	P06703	90 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	C3orf79	P0CE67	100 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	COX17	Q14061	63 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	C9orf129	Q5T035	196 aa	Known RBP	4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	LINC01545	Q5VT33	79 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	PLEKHB2	Q96CS7	222 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	XAGE1A	Q9HD64	81 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	ERG28	Q9UKR5	140 aa		4.82	□□□□□ -1.64
PTK2-242	ENST00000523067	MYMX	A0A1B0GTQ4	84 aa		4.81	□□□□□ -1.64
PTK2-242	ENST00000523067	FAM168B	A1KXE4	195 aa		4.81	□□□□□ -1.64

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