RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
SDCBP-210ENST00000522843 SLC25A29Q8N8R3 303 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 TOMM6Q96B49 74 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 KIR2DL4Q99706 377 aa4.16□□□□□ -1.74
SDCBP-210ENST00000522843 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 IGIPA6NJ69 53 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 ATP5LO75964 103 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 C3orf79P0CE67 100 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 LINC00694P0DN24 101 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 UBE2D3P61077 147 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 UBE2D2P62837 147 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 ZNF56Q15929 161 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 FAM74A4Q5TZK3 123 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 ATP6V0E2Q8NHE4 81 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 GTSF1LQ9H1H1 148 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 PYGO1Q9Y3Y4 419 aa4.15□□□□□ -1.75
SDCBP-210ENST00000522843 TRAV12-1A0A0B4J245 112 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 TSHBP01222 138 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 CIRBPQ14011 172 aaKnown RBP4.14□□□□□ -1.75
SDCBP-210ENST00000522843 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 ERASQ7Z444 233 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 SH2D6Q7Z4S9 175 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 TMEM141Q96I45 108 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 TIMM17AQ99595 171 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 TIMM21Q9BVV7 248 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 Q9UF83 564 aa4.14□□□□□ -1.75
SDCBP-210ENST00000522843 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 IGHV3-73A0A0B4J1V6 119 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 H7C423 109 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 PMCHL1Q16048 86 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 TEX43Q6ZNM6 134 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 IFI27L1Q96BM0 104 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 PRADC1Q9BSG0 188 aa4.13□□□□□ -1.75
SDCBP-210ENST00000522843 CSDC2Q9Y534 153 aaKnown RBP4.13□□□□□ -1.75
SDCBP-210ENST00000522843 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 A0A0U1RQV1 116 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-210ENST00000522843 C2orf66Q6UXQ4 117 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 MRPL52Q86TS9 123 aaKnown RBP4.12□□□□□ -1.75
SDCBP-210ENST00000522843 C9orf163Q8N9P6 203 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 FAM104AQ969W3 186 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 C12orf57Q99622 126 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
SDCBP-210ENST00000522843 A0A087WX48 190 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 C20orf202A1L168 122 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 PRSS1P07477 247 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 KRTDAPP60985 99 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
SDCBP-210ENST00000522843 SMAGPQ0VAQ4 97 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 COTL1Q14019 142 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 NTM-AS1Q6ZSK4 140 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 SCGB3A1Q96QR1 104 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 AMELXQ99217 191 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
SDCBP-210ENST00000522843 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
SDCBP-210ENST00000522843 S100A12P80511 92 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 SRSF9Q13242 221 aaKnown RBP eCLIP4.1□□□□□ -1.75
SDCBP-210ENST00000522843 FAM19A3Q7Z5A8 133 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SDCBP-210ENST00000522843 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 PMVKQ15126 192 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 Q6ZN92 141 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 ZNF664Q8N3J9 261 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 UBE2WQ96B02 151 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 RMI2Q96E14 147 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
SDCBP-210ENST00000522843 IGLV4-3A0A075B6K6 122 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 TRBV25-1A0A075B6N4 114 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 F8VRH5 84 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 ZNF25P17030 456 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-210ENST00000522843 PKIAP61925 76 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
SDCBP-210ENST00000522843 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 CDC42SE2Q9NRR3 84 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 PLAC8Q9NZF1 115 aa4.08□□□□□ -1.76
SDCBP-210ENST00000522843 CCL25O15444 150 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 DLEU1O43261 78 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 DPM2O94777 84 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 CFC1BP0CG36 223 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 CFC1P0CG37 223 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 IGLC3P0DOY3 106 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 PLNP26678 52 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 KRTAP26-1Q6PEX3 210 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 TMEM243Q9BU79 118 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 VCX2Q9H322 139 aa4.07□□□□□ -1.76
SDCBP-210ENST00000522843 IGLV4-69A0A075B6H9 119 aa4.06□□□□□ -1.76
SDCBP-210ENST00000522843 IGKCP01834 107 aa4.06□□□□□ -1.76
SDCBP-210ENST00000522843 FGF6P10767 208 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms