RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
SYNPO-205ENST00000522122 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
SYNPO-205ENST00000522122 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
SYNPO-205ENST00000522122 DHRS4-AS1Q9P1J3 65 aa9.86□□□□□ -0.83
SYNPO-205ENST00000522122 FHL2Q14192 279 aa9.86□□□□□ -0.83
SYNPO-205ENST00000522122 POLQO75417 2590 aa9.85□□□□□ -0.83
SYNPO-205ENST00000522122 NDUFC1O43677 76 aa9.85□□□□□ -0.83
SYNPO-205ENST00000522122 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
SYNPO-205ENST00000522122 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
SYNPO-205ENST00000522122 Q8N814 137 aa9.84□□□□□ -0.83
SYNPO-205ENST00000522122 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.84□□□□□ -0.83
SYNPO-205ENST00000522122 C4orf48Q5BLP8 95 aa9.84□□□□□ -0.83
SYNPO-205ENST00000522122 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
SYNPO-205ENST00000522122 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
SYNPO-205ENST00000522122 IL17DQ8TAD2 202 aa9.83□□□□□ -0.84
SYNPO-205ENST00000522122 MPLKIPQ8TAP9 179 aa9.83□□□□□ -0.84
SYNPO-205ENST00000522122 A0A087WYN8 130 aa9.82□□□□□ -0.84
SYNPO-205ENST00000522122 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
SYNPO-205ENST00000522122 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
SYNPO-205ENST00000522122 ZNF462Q96JM2 2506 aa9.82□□□□□ -0.84
SYNPO-205ENST00000522122 EGFEM1PQ0D2K5 195 aa9.81□□□□□ -0.84
SYNPO-205ENST00000522122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
SYNPO-205ENST00000522122 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
SYNPO-205ENST00000522122 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
SYNPO-205ENST00000522122 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
SYNPO-205ENST00000522122 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
SYNPO-205ENST00000522122 MKI67P46013 3256 aaKnown RBP9.79□□□□□ -0.84
SYNPO-205ENST00000522122 TRBV7-7A0A0K0K1E9 115 aa9.79□□□□□ -0.84
SYNPO-205ENST00000522122 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
SYNPO-205ENST00000522122 ATP5EP56381 51 aaPredicted RBP9.79□□□□□ -0.84
SYNPO-205ENST00000522122 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
SYNPO-205ENST00000522122 A0A087WVE0 104 aa9.79□□□□□ -0.84
SYNPO-205ENST00000522122 IGLV5-39A0A0G2JS06 123 aa9.79□□□□□ -0.84
SYNPO-205ENST00000522122 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
SYNPO-205ENST00000522122 ACANP16112 2415 aa9.77□□□□□ -0.84
SYNPO-205ENST00000522122 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.84
SYNPO-205ENST00000522122 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
SYNPO-205ENST00000522122 SMR3AQ99954 134 aa9.77□□□□□ -0.85
SYNPO-205ENST00000522122 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.85
SYNPO-205ENST00000522122 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
SYNPO-205ENST00000522122 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
SYNPO-205ENST00000522122 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
SYNPO-205ENST00000522122 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
SYNPO-205ENST00000522122 C16orf95Q9H693 158 aa9.76□□□□□ -0.85
SYNPO-205ENST00000522122 FASNP49327 2511 aaKnown RBP9.76□□□□□ -0.85
SYNPO-205ENST00000522122 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
SYNPO-205ENST00000522122 LITAFQ99732 161 aa9.75□□□□□ -0.85
SYNPO-205ENST00000522122 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
SYNPO-205ENST00000522122 A0A0J9YWU9 116 aa9.75□□□□□ -0.85
SYNPO-205ENST00000522122 MUC4Q99102 2169 aa9.73□□□□□ -0.85
SYNPO-205ENST00000522122 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
SYNPO-205ENST00000522122 FHL3Q13643 280 aa9.72□□□□□ -0.85
SYNPO-205ENST00000522122 LINC01561Q8N1V8 128 aa9.72□□□□□ -0.85
SYNPO-205ENST00000522122 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
SYNPO-205ENST00000522122 LINC00846Q9NV44 126 aa9.71□□□□□ -0.86
SYNPO-205ENST00000522122 ANKRD17O75179 2603 aaKnown RBP9.71□□□□□ -0.86
SYNPO-205ENST00000522122 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
SYNPO-205ENST00000522122 SPTSSBQ8NFR3 76 aa9.7□□□□□ -0.86
SYNPO-205ENST00000522122 RETNQ9HD89 108 aa9.7□□□□□ -0.86
SYNPO-205ENST00000522122 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
SYNPO-205ENST00000522122 Q6ZTC4 211 aa9.7□□□□□ -0.86
SYNPO-205ENST00000522122 Q8N2B8 174 aa9.7□□□□□ -0.86
SYNPO-205ENST00000522122 PRR4Q16378 134 aa9.69□□□□□ -0.86
SYNPO-205ENST00000522122 Q8N3U1 123 aa9.69□□□□□ -0.86
SYNPO-205ENST00000522122 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
SYNPO-205ENST00000522122 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
SYNPO-205ENST00000522122 V9GYY9 64 aa9.68□□□□□ -0.86
SYNPO-205ENST00000522122 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
SYNPO-205ENST00000522122 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
SYNPO-205ENST00000522122 SVIPQ8NHG7 77 aa9.67□□□□□ -0.86
SYNPO-205ENST00000522122 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
SYNPO-205ENST00000522122 Q9UF83 564 aa9.67□□□□□ -0.86
SYNPO-205ENST00000522122 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
SYNPO-205ENST00000522122 A8MTW9 85 aa9.66□□□□□ -0.86
SYNPO-205ENST00000522122 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
SYNPO-205ENST00000522122 SEC61GP60059 68 aa9.65□□□□□ -0.86
SYNPO-205ENST00000522122 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
SYNPO-205ENST00000522122 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.86
SYNPO-205ENST00000522122 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
SYNPO-205ENST00000522122 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
SYNPO-205ENST00000522122 SOSTDC1Q6X4U4 206 aa9.65□□□□□ -0.87
SYNPO-205ENST00000522122 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
SYNPO-205ENST00000522122 Q6ZVQ6 151 aa9.64□□□□□ -0.87
SYNPO-205ENST00000522122 M0R2N4 97 aa9.63□□□□□ -0.87
SYNPO-205ENST00000522122 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
SYNPO-205ENST00000522122 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
SYNPO-205ENST00000522122 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
SYNPO-205ENST00000522122 F8WDY8 70 aa9.62□□□□□ -0.87
SYNPO-205ENST00000522122 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
SYNPO-205ENST00000522122 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
SYNPO-205ENST00000522122 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
SYNPO-205ENST00000522122 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
SYNPO-205ENST00000522122 IGLV9-49A0A0B4J1Y8 123 aa9.61□□□□□ -0.87
SYNPO-205ENST00000522122 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
SYNPO-205ENST00000522122 Q6ZRU5 148 aa9.61□□□□□ -0.87
SYNPO-205ENST00000522122 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
SYNPO-205ENST00000522122 Q8N9L7 120 aa9.6□□□□□ -0.87
SYNPO-205ENST00000522122 LINC01547P58512 204 aaPredicted RBP9.59□□□□□ -0.87
SYNPO-205ENST00000522122 EIF4EBP3O60516 100 aaPredicted RBP9.59□□□□□ -0.87
SYNPO-205ENST00000522122 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms