RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GVQW2A0A096LPI5 108 aaPredicted RBP14.08□□□□□ -0.16
R3HCC1-208ENST00000522012 WFDC2Q14508 124 aa14.07□□□□□ -0.16
R3HCC1-208ENST00000522012 SCGB1D4Q6XE38 83 aa14.07□□□□□ -0.16
R3HCC1-208ENST00000522012 ALMS1Q8TCU4 4167 aa14.07□□□□□ -0.16
R3HCC1-208ENST00000522012 NTN5Q8WTR8 489 aaPredicted RBP14.07□□□□□ -0.16
R3HCC1-208ENST00000522012 CXCL5P42830 114 aa14.06□□□□□ -0.16
R3HCC1-208ENST00000522012 HERV-K104P63124 156 aa14.05□□□□□ -0.16
R3HCC1-208ENST00000522012 SFTA2Q6UW10 78 aa14.05□□□□□ -0.16
R3HCC1-208ENST00000522012 CAMK2N2Q96S95 79 aa14.05□□□□□ -0.16
R3HCC1-208ENST00000522012 A0A0J9YXY3 114 aa14.04□□□□□ -0.16
R3HCC1-208ENST00000522012 UNQ6190/PRO20217Q6UXQ8 127 aa14.04□□□□□ -0.16
R3HCC1-208ENST00000522012 C2orf48Q96LS8 159 aa14.03□□□□□ -0.16
R3HCC1-208ENST00000522012 LRCOL1A6NCL2 159 aa14.02□□□□□ -0.16
R3HCC1-208ENST00000522012 HNRNPA3P51991 378 aaKnown RBP14.02□□□□□ -0.16
R3HCC1-208ENST00000522012 C10orf25Q5T742 122 aa14.02□□□□□ -0.16
R3HCC1-208ENST00000522012 MEIG1Q5JSS6 88 aa14.01□□□□□ -0.17
R3HCC1-208ENST00000522012 C2orf91Q6ZV80 131 aa14.01□□□□□ -0.17
R3HCC1-208ENST00000522012 PCP4L1A6NKN8 68 aa14□□□□□ -0.17
R3HCC1-208ENST00000522012 C14orf177Q52M58 125 aa14□□□□□ -0.17
R3HCC1-208ENST00000522012 F8WDY8 70 aa14□□□□□ -0.17
R3HCC1-208ENST00000522012 EPPK1P58107 5090 aaKnown RBP14□□□□□ -0.17
R3HCC1-208ENST00000522012 SYCNQ0VAF6 134 aa13.99□□□□□ -0.17
R3HCC1-208ENST00000522012 Q6ZRU5 148 aa13.99□□□□□ -0.17
R3HCC1-208ENST00000522012 A0A0U1RRA0 63 aa13.98□□□□□ -0.17
R3HCC1-208ENST00000522012 DDTP30046 118 aa13.98□□□□□ -0.17
R3HCC1-208ENST00000522012 CIRBPQ14011 172 aaKnown RBP13.98□□□□□ -0.17
R3HCC1-208ENST00000522012 A0A087WTM6 91 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 SLPIP03973 132 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 SMIM13P0DJ93 91 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 C9orf116Q5BN46 136 aaPredicted RBP13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 HIGD1BQ9P298 99 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 C6orf48Q9UBA6 75 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 ERG28Q9UKR5 140 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 BIRC6Q9NR09 4857 aa13.97□□□□□ -0.17
R3HCC1-208ENST00000522012 PFN2P35080 140 aa13.96□□□□□ -0.17
R3HCC1-208ENST00000522012 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 LINC00587B1AMM8 73 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 RTL8CO15255 209 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 LINC00158P58513 81 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 CARD19Q96LW7 228 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 KMT2AQ03164 3969 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 TRBV30A0A0K0K1B3 111 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 TMEM238C9JI98 176 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 TIMM17BO60830 172 aa13.95□□□□□ -0.18
R3HCC1-208ENST00000522012 SRSF9Q13242 221 aaKnown RBP eCLIP13.94□□□□□ -0.18
R3HCC1-208ENST00000522012 ADAMTSL4-AS1Q5T5F5 129 aa13.94□□□□□ -0.18
R3HCC1-208ENST00000522012 Q8N814 137 aa13.94□□□□□ -0.18
R3HCC1-208ENST00000522012 LITAFQ99732 161 aa13.94□□□□□ -0.18
R3HCC1-208ENST00000522012 CTAG1AP78358 180 aa13.93□□□□□ -0.18
R3HCC1-208ENST00000522012 TNP2Q05952 138 aa13.92□□□□□ -0.18
R3HCC1-208ENST00000522012 DAND5Q8N907 189 aa13.92□□□□□ -0.18
R3HCC1-208ENST00000522012 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
R3HCC1-208ENST00000522012 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
R3HCC1-208ENST00000522012 COX17Q14061 63 aa13.9□□□□□ -0.18
R3HCC1-208ENST00000522012 SPANXB1Q9NS25 103 aaPredicted RBP13.9□□□□□ -0.18
R3HCC1-208ENST00000522012 EREGO14944 169 aa13.9□□□□□ -0.19
R3HCC1-208ENST00000522012 CNBPP62633 177 aaKnown RBP13.9□□□□□ -0.19
R3HCC1-208ENST00000522012 MIR7-3HGQ8N6C7 128 aa13.9□□□□□ -0.19
R3HCC1-208ENST00000522012 DNAH6Q9C0G6 4158 aa13.89□□□□□ -0.19
R3HCC1-208ENST00000522012 DNAH10Q8IVF4 4471 aa13.89□□□□□ -0.19
R3HCC1-208ENST00000522012 RNF151Q2KHN1 245 aa13.89□□□□□ -0.19
R3HCC1-208ENST00000522012 NPC2P61916 151 aa13.88□□□□□ -0.19
R3HCC1-208ENST00000522012 SPANXDQ9BXN6 97 aa13.88□□□□□ -0.19
R3HCC1-208ENST00000522012 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
R3HCC1-208ENST00000522012 HSD52Q0P140 79 aa13.87□□□□□ -0.19
R3HCC1-208ENST00000522012 TAL2Q16559 108 aa13.86□□□□□ -0.19
R3HCC1-208ENST00000522012 Q6ZVH6 145 aa13.85□□□□□ -0.19
R3HCC1-208ENST00000522012 NDUFC2-KCTD14E9PQ53 114 aa13.85□□□□□ -0.19
R3HCC1-208ENST00000522012 GCSHP23434 173 aa13.85□□□□□ -0.19
R3HCC1-208ENST00000522012 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
R3HCC1-208ENST00000522012 HYDINQ4G0P3 5121 aa13.84□□□□□ -0.19
R3HCC1-208ENST00000522012 CEND1Q8N111 149 aa13.83□□□□□ -0.2
R3HCC1-208ENST00000522012 LINC00308Q8TCZ7 52 aa13.83□□□□□ -0.2
R3HCC1-208ENST00000522012 DNAH2Q9P225 4427 aa13.82□□□□□ -0.2
R3HCC1-208ENST00000522012 HINT1P49773 126 aaPredicted RBP13.82□□□□□ -0.2
R3HCC1-208ENST00000522012 RPL18AQ02543 176 aaKnown RBP13.82□□□□□ -0.2
R3HCC1-208ENST00000522012 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
R3HCC1-208ENST00000522012 EIF4EBP3O60516 100 aaPredicted RBP13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 IFITM1P13164 125 aa13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 GAGE2EQ4V326 116 aa13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 Q6ZRP5 223 aa13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 GAGE2DQ9UEU5 116 aa13.81□□□□□ -0.2
R3HCC1-208ENST00000522012 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 TLX1NBP0CAT3 122 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 SOSTDC1Q6X4U4 206 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 C9orf163Q8N9P6 203 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 XAGE1AQ9HD64 81 aa13.8□□□□□ -0.2
R3HCC1-208ENST00000522012 PTTG1IPP53801 180 aa13.79□□□□□ -0.2
R3HCC1-208ENST00000522012 LINC01620Q4KN68 170 aa13.79□□□□□ -0.2
R3HCC1-208ENST00000522012 IGLV5-52A0A0A0MRZ9 124 aa13.78□□□□□ -0.2
R3HCC1-208ENST00000522012 M0R143 59 aa13.78□□□□□ -0.2
R3HCC1-208ENST00000522012 GAGE2BQ13066 116 aa13.78□□□□□ -0.2
R3HCC1-208ENST00000522012 BVES-AS1Q5T3Y7 98 aa13.78□□□□□ -0.2
R3HCC1-208ENST00000522012 LINC00336Q6ZUF6 198 aa13.78□□□□□ -0.2
R3HCC1-208ENST00000522012 FXYD2P54710 66 aa13.77□□□□□ -0.21
R3HCC1-208ENST00000522012 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
R3HCC1-208ENST00000522012 BATFQ16520 125 aa13.77□□□□□ -0.21
R3HCC1-208ENST00000522012 A4D1N5 150 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms