RNA–Protein interactions for RNA: ENST00000521610.5

HDAC2-212, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-212ENST00000521610 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
HDAC2-212ENST00000521610 PACRGQ96M98 296 aaPredicted RBP6.73□□□□□ -1.33
HDAC2-212ENST00000521610 C6orf48Q9UBA6 75 aa6.73□□□□□ -1.33
HDAC2-212ENST00000521610 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
HDAC2-212ENST00000521610 A0A096LNJ9 63 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 Q8IZM0 81 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
HDAC2-212ENST00000521610 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
HDAC2-212ENST00000521610 CKS1BP61024 79 aa6.71□□□□□ -1.34
HDAC2-212ENST00000521610 C2orf82Q6UX34 121 aa6.71□□□□□ -1.34
HDAC2-212ENST00000521610 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
HDAC2-212ENST00000521610 A0A1W2PNN7 141 aa6.7□□□□□ -1.34
HDAC2-212ENST00000521610 ATP5LO75964 103 aa6.7□□□□□ -1.34
HDAC2-212ENST00000521610 PMCHL1Q16048 86 aa6.7□□□□□ -1.34
HDAC2-212ENST00000521610 PDZD11Q5EBL8 140 aa6.7□□□□□ -1.34
HDAC2-212ENST00000521610 Q6ZRP5 223 aa6.7□□□□□ -1.34
HDAC2-212ENST00000521610 CHCHD1Q96BP2 118 aaKnown RBP6.7□□□□□ -1.34
HDAC2-212ENST00000521610 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
HDAC2-212ENST00000521610 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
HDAC2-212ENST00000521610 NDUFA6P56556 154 aa6.69□□□□□ -1.34
HDAC2-212ENST00000521610 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
HDAC2-212ENST00000521610 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 H3BRM9 83 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 TRGC2P03986 189 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 CXCL5P42830 114 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 HNRNPA3P51991 378 aaKnown RBP6.68□□□□□ -1.34
HDAC2-212ENST00000521610 GAGE2EQ4V326 116 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 XP32Q5T750 250 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 GAGE2DQ9UEU5 116 aa6.68□□□□□ -1.34
HDAC2-212ENST00000521610 F8VRH5 84 aa6.67□□□□□ -1.34
HDAC2-212ENST00000521610 OXTP01178 125 aa6.67□□□□□ -1.34
HDAC2-212ENST00000521610 PRR3P79522 188 aaKnown RBP6.67□□□□□ -1.34
HDAC2-212ENST00000521610 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
HDAC2-212ENST00000521610 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
HDAC2-212ENST00000521610 COLCA2A8K830 154 aa6.66□□□□□ -1.34
HDAC2-212ENST00000521610 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
HDAC2-212ENST00000521610 HSBP1O75506 76 aa6.65□□□□□ -1.34
HDAC2-212ENST00000521610 FAM168BA1KXE4 195 aa6.64□□□□□ -1.35
HDAC2-212ENST00000521610 ZNF22P17026 224 aaPredicted RBP6.64□□□□□ -1.35
HDAC2-212ENST00000521610 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
HDAC2-212ENST00000521610 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
HDAC2-212ENST00000521610 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
HDAC2-212ENST00000521610 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
HDAC2-212ENST00000521610 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
HDAC2-212ENST00000521610 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
HDAC2-212ENST00000521610 FAM19A5Q7Z5A7 132 aaPredicted RBP6.63□□□□□ -1.35
HDAC2-212ENST00000521610 FAM19A2Q8N3H0 131 aa6.63□□□□□ -1.35
HDAC2-212ENST00000521610 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
HDAC2-212ENST00000521610 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
HDAC2-212ENST00000521610 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
HDAC2-212ENST00000521610 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
HDAC2-212ENST00000521610 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
HDAC2-212ENST00000521610 M0QXV9 152 aa6.61□□□□□ -1.35
HDAC2-212ENST00000521610 SERF1AO75920 110 aa6.61□□□□□ -1.35
HDAC2-212ENST00000521610 SPINK6Q6UWN8 80 aa6.61□□□□□ -1.35
HDAC2-212ENST00000521610 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
HDAC2-212ENST00000521610 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
HDAC2-212ENST00000521610 LEPROTL1O95214 131 aa6.6□□□□□ -1.35
HDAC2-212ENST00000521610 LINC00310P59036 64 aa6.6□□□□□ -1.35
HDAC2-212ENST00000521610 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC2-212ENST00000521610 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
HDAC2-212ENST00000521610 SCO1O75880 301 aa6.59□□□□□ -1.35
HDAC2-212ENST00000521610 ODF1Q14990 250 aa6.59□□□□□ -1.35
HDAC2-212ENST00000521610 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
HDAC2-212ENST00000521610 SFTA2Q6UW10 78 aa6.59□□□□□ -1.35
HDAC2-212ENST00000521610 TMEM223A0PJW6 202 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 NUPR1O60356 82 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 UBE2BP63146 152 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 HSPB8Q9UJY1 196 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 C22orf24Q9Y442 160 aa6.58□□□□□ -1.36
HDAC2-212ENST00000521610 COX17Q14061 63 aa6.57□□□□□ -1.36
HDAC2-212ENST00000521610 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
HDAC2-212ENST00000521610 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
HDAC2-212ENST00000521610 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
HDAC2-212ENST00000521610 H0Y8G0 127 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 IGLV7-43P04211 117 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 FABP4P15090 132 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 PFN2P35080 140 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 REG3GQ6UW15 175 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
HDAC2-212ENST00000521610 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
HDAC2-212ENST00000521610 MRPL55Q7Z7F7 128 aaKnown RBP6.55□□□□□ -1.36
HDAC2-212ENST00000521610 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
HDAC2-212ENST00000521610 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
HDAC2-212ENST00000521610 LINC01600Q96MT4 127 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms