RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RPL39P62891 51 aaKnown RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 REG3AQ06141 175 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 MIAQ16674 131 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 ENHOQ6UWT2 76 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 LINC00336Q6ZUF6 198 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 BAGE3Q86Y29 109 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 LINC00269Q8N2A0 174 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 ZNF664Q8N3J9 261 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 CHCHD10Q8WYQ3 142 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 FAM104AQ969W3 186 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 CHCHD1Q96BP2 118 aaKnown RBP2.02□□□□□ -2.09
VPS13B-209ENST00000521559 RMI2Q96E14 147 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 CDC42SE2Q9NRR3 84 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 CYSLTR1Q9Y271 337 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 UBE2D4Q9Y2X8 147 aa2.02□□□□□ -2.09
VPS13B-209ENST00000521559 IGKV2D-24A0A075B6R9 120 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 TRAV8-4A0A0B4J246 113 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 CCL25O15444 150 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 CRPP02741 224 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 SS18Q15532 418 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 KRTAP26-1Q6PEX3 210 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 CLPSL2Q6UWE3 100 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 Q6ZUT4 128 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 Q8N9L7 120 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 C7orf33Q8WU49 177 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 TOMM6Q96B49 74 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 TMEM141Q96I45 108 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 SCGB3A1Q96QR1 104 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 TIMM17AQ99595 171 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 NACAE9PAV3 2078 aa2.01□□□□□ -2.09
VPS13B-209ENST00000521559 A0A087WTM6 91 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 A0A096LNJ9 63 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 TRAV13-1A0A0B4J241 112 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 LRCOL1A6NCL2 159 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 C1orf196B1AJZ1 125 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2□□□□□ -2.09
VPS13B-209ENST00000521559 PSCAO43653 123 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 NUPR1O60356 82 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BKO60814 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HSBP1O75506 76 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HBDP02042 147 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BJP06899 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BOP23527 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BBP33778 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BDP58876 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BCP62807 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 PMCHL1Q16048 86 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST2H2BEQ16778 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 PDZD11Q5EBL8 140 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
VPS13B-209ENST00000521559 C6orf226Q5I0X4 101 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 COA6Q5JTJ3 125 aaKnown RBP2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST2H2BFQ5QNW6 126 aaPredicted RBP2□□□□□ -2.09
VPS13B-209ENST00000521559 Q6ZN92 141 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 NKAPP1Q8N9T2 125 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 BAALCQ8WXS3 180 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BHQ93079 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 AMELXQ99217 191 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BNQ99877 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 HIST1H2BMQ99879 126 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 C2orf88Q9BSF0 95 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 CST9LQ9H4G1 147 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
VPS13B-209ENST00000521559 TENM2Q9NT68 2774 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 PRKDCP78527 4128 aaKnown RBP1.99□□□□□ -2.09
VPS13B-209ENST00000521559 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 COX7A2LO14548 114 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 XCL1P47992 114 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 UBE2D1P51668 147 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 NDUFA6P56556 154 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 SEC11AP67812 179 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 COX6A2Q02221 97 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 PMVKQ15126 192 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 TEX43Q6ZNM6 134 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 LINC00173Q6ZV60 143 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 FAM19A3Q7Z5A8 133 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 FAM19A2Q8N3H0 131 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 IFI27L1Q96BM0 104 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 HSPB8Q9UJY1 196 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 TGP01266 2768 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 COL7A1Q02388 2944 aa1.99□□□□□ -2.09
VPS13B-209ENST00000521559 HUWE1Q7Z6Z7 4374 aaKnown RBP1.98□□□□□ -2.09
VPS13B-209ENST00000521559 CMYA5Q8N3K9 4069 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 TRAV12-1A0A0B4J245 112 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 IGHV3OR16-9A0A0B4J2B5 98 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 A0A0J9YXV3 536 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 TINCRA0A1B0GVN0 87 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 LECT2O14960 151 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 ZNF861PO60384 105 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 LEPROTL1O95214 131 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 APOMO95445 188 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 HERVK_113P63121 156 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 WFDC2Q14508 124 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 C5orf38Q86SI9 138 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms