RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PRSS2P07478 247 aa12.92□□□□□ -0.34
TRIM35-203ENST00000521253 TLX1NBP0CAT3 122 aa12.92□□□□□ -0.34
TRIM35-203ENST00000521253 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
TRIM35-203ENST00000521253 Q6ZRP5 223 aa12.91□□□□□ -0.34
TRIM35-203ENST00000521253 Q8IZM0 81 aa12.91□□□□□ -0.34
TRIM35-203ENST00000521253 IGLV5-45A0A087WSX0 123 aa12.9□□□□□ -0.34
TRIM35-203ENST00000521253 KRTAP29-1A8MX34 341 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-203ENST00000521253 C9orf116Q5BN46 136 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-203ENST00000521253 C6orf226Q5I0X4 101 aa12.9□□□□□ -0.34
TRIM35-203ENST00000521253 CKS1BP61024 79 aa12.89□□□□□ -0.35
TRIM35-203ENST00000521253 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
TRIM35-203ENST00000521253 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
TRIM35-203ENST00000521253 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
TRIM35-203ENST00000521253 J3QL48 77 aa12.87□□□□□ -0.35
TRIM35-203ENST00000521253 NDUFA6P56556 154 aa12.87□□□□□ -0.35
TRIM35-203ENST00000521253 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
TRIM35-203ENST00000521253 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
TRIM35-203ENST00000521253 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
TRIM35-203ENST00000521253 TRGC2P03986 189 aa12.85□□□□□ -0.35
TRIM35-203ENST00000521253 IGLC3P0DOY3 106 aa12.85□□□□□ -0.35
TRIM35-203ENST00000521253 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
TRIM35-203ENST00000521253 FAM168BA1KXE4 195 aa12.84□□□□□ -0.35
TRIM35-203ENST00000521253 ATP5LO75964 103 aa12.84□□□□□ -0.35
TRIM35-203ENST00000521253 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
TRIM35-203ENST00000521253 F8VRH5 84 aa12.83□□□□□ -0.36
TRIM35-203ENST00000521253 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
TRIM35-203ENST00000521253 OXTP01178 125 aa12.82□□□□□ -0.36
TRIM35-203ENST00000521253 CXCL5P42830 114 aa12.82□□□□□ -0.36
TRIM35-203ENST00000521253 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
TRIM35-203ENST00000521253 H3BRM9 83 aa12.81□□□□□ -0.36
TRIM35-203ENST00000521253 BAGE3Q86Y29 109 aa12.81□□□□□ -0.36
TRIM35-203ENST00000521253 COLCA2A8K830 154 aa12.8□□□□□ -0.36
TRIM35-203ENST00000521253 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
TRIM35-203ENST00000521253 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-203ENST00000521253 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
TRIM35-203ENST00000521253 KRTAP7-1Q8IUC3 87 aa12.79□□□□□ -0.36
TRIM35-203ENST00000521253 HSBP1O75506 76 aa12.77□□□□□ -0.37
TRIM35-203ENST00000521253 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
TRIM35-203ENST00000521253 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
TRIM35-203ENST00000521253 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
TRIM35-203ENST00000521253 IFI27L1Q96BM0 104 aa12.76□□□□□ -0.37
TRIM35-203ENST00000521253 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
TRIM35-203ENST00000521253 XAGE1AQ9HD64 81 aa12.75□□□□□ -0.37
TRIM35-203ENST00000521253 CHTOPQ9Y3Y2 248 aaKnown RBP12.75□□□□□ -0.37
TRIM35-203ENST00000521253 LINC00310P59036 64 aa12.74□□□□□ -0.37
TRIM35-203ENST00000521253 M0QXV9 152 aa12.73□□□□□ -0.37
TRIM35-203ENST00000521253 SERF1AO75920 110 aa12.73□□□□□ -0.37
TRIM35-203ENST00000521253 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
TRIM35-203ENST00000521253 SCO1O75880 301 aa12.72□□□□□ -0.37
TRIM35-203ENST00000521253 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRIM35-203ENST00000521253 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
TRIM35-203ENST00000521253 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
TRIM35-203ENST00000521253 C1orf137Q5JT78 98 aa12.71□□□□□ -0.37
TRIM35-203ENST00000521253 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
TRIM35-203ENST00000521253 SPINK6Q6UWN8 80 aa12.71□□□□□ -0.37
TRIM35-203ENST00000521253 NUPR1O60356 82 aa12.68□□□□□ -0.38
TRIM35-203ENST00000521253 MT1HL1P0DM35 61 aa12.67□□□□□ -0.38
TRIM35-203ENST00000521253 UBE2BP63146 152 aa12.67□□□□□ -0.38
TRIM35-203ENST00000521253 C22orf24Q9Y442 160 aa12.67□□□□□ -0.38
TRIM35-203ENST00000521253 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
TRIM35-203ENST00000521253 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
TRIM35-203ENST00000521253 TNXBP22105 4242 aa12.64□□□□□ -0.39
TRIM35-203ENST00000521253 H0Y8G0 127 aa12.64□□□□□ -0.39
TRIM35-203ENST00000521253 PFN2P35080 140 aa12.64□□□□□ -0.39
TRIM35-203ENST00000521253 ODF1Q14990 250 aa12.64□□□□□ -0.39
TRIM35-203ENST00000521253 ATP6V1G1O75348 118 aa12.63□□□□□ -0.39
TRIM35-203ENST00000521253 IGLV7-43P04211 117 aa12.63□□□□□ -0.39
TRIM35-203ENST00000521253 S100A1P23297 94 aa12.63□□□□□ -0.39
TRIM35-203ENST00000521253 FABP4P15090 132 aa12.62□□□□□ -0.39
TRIM35-203ENST00000521253 REG3GQ6UW15 175 aa12.62□□□□□ -0.39
TRIM35-203ENST00000521253 ZNF625Q96I27 306 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-203ENST00000521253 LINC01600Q96MT4 127 aa12.62□□□□□ -0.39
TRIM35-203ENST00000521253 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
TRIM35-203ENST00000521253 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
TRIM35-203ENST00000521253 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-203ENST00000521253 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
TRIM35-203ENST00000521253 TP73-AS1Q9UF72 201 aa12.61□□□□□ -0.39
TRIM35-203ENST00000521253 PLA2G2DQ9UNK4 145 aa12.61□□□□□ -0.39
TRIM35-203ENST00000521253 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BKO60814 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BJP06899 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BOP23527 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BBP33778 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BDP58876 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BCP62807 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 COX17Q14061 63 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST2H2BEQ16778 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BHQ93079 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BNQ99877 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 HIST1H2BMQ99879 126 aa12.59□□□□□ -0.39
TRIM35-203ENST00000521253 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
TRIM35-203ENST00000521253 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
TRIM35-203ENST00000521253 IGLV5-37A0A075B6J1 123 aa12.56□□□□□ -0.4
TRIM35-203ENST00000521253 PLNP26678 52 aa12.55□□□□□ -0.4
TRIM35-203ENST00000521253 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
TRIM35-203ENST00000521253 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
TRIM35-203ENST00000521253 GAGE10A6NGK3 116 aa12.54□□□□□ -0.4
TRIM35-203ENST00000521253 NKAPP1Q8N9T2 125 aa12.54□□□□□ -0.4
TRIM35-203ENST00000521253 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms