RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 C20orf203Q8NBC4 194 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 TYMSOSQ8TAI1 123 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 FXYD5Q96DB9 178 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 AP1S3Q96PC3 154 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 CST9LQ9H4G1 147 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-208ENST00000521037 IGKV1OR2-108A0A075B7D4 117 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 IGHV1-24A0A0C4DH33 117 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 A0A0J9YX75 114 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 FAM168BA1KXE4 195 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 C7orf71A4D174 169 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 PGPA6NDG6 321 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 J3QR89 54 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 LECT2O14960 151 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 PSPHP1O15172 72 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 SPINK4O60575 86 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 TCRAP04437 139 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 LYZP61626 148 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 CACNG7P62955 275 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 HSD52Q0P140 79 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 MPV17L2Q567V2 206 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 TMEM97Q5BJF2 176 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 LINC00305Q7Z4B0 112 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 TMEM75Q8N9X5 138 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 FAM104AQ969W3 186 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 VPS25Q9BRG1 176 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 SLC25A39Q9BZJ4 359 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-208ENST00000521037 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-208ENST00000521037 HIGD1BQ9P298 99 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 HIGD1AQ9Y241 93 aa2.32□□□□□ -2.04
VPS13B-208ENST00000521037 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 IGKV1D-37A0A075B6S9 117 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 MUC21A0A0G2JKD1 596 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 MUC21A0A140T8X8 626 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 MT1HP80294 61 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 PSG9Q00887 426 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 C9orf129Q5T035 196 aaKnown RBP2.31□□□□□ -2.04
VPS13B-208ENST00000521037 AMMECR1LQ6DCA0 310 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 FOXI2Q6ZQN5 318 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 SH2D6Q7Z4S9 175 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 Q86TA4 180 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 ATOH7Q8N100 152 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 CEND1Q8N111 149 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 ORMDL3Q8N138 153 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 C16orf74Q96GX8 76 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
VPS13B-208ENST00000521037 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
VPS13B-208ENST00000521037 TRAV5A0A0B4J249 113 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 TRAV8-6A0A0B4J262 113 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 LINC01546A6NGU7 62 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 LINC01549A6NIU2 74 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 K7EP34 96 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 HBDP02042 147 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 CRYGDP07320 174 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 PYYP10082 97 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 FABP2P12104 132 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 GATA2P23769 480 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-208ENST00000521037 ORMDL2Q53FV1 153 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 FAM104BQ5XKR9 115 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 Q6ZTI0 123 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 NEGR1Q7Z3B1 354 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 FER1L6-AS1Q8NA97 138 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 BLNKQ8WV28 456 aa2.3□□□□□ -2.04
VPS13B-208ENST00000521037 NXT2Q9NPJ8 142 aaKnown RBP2.3□□□□□ -2.04
VPS13B-208ENST00000521037 TRBV19A0A075B6N1 114 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 A0A1W2PPM0 123 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 F8W1H4 67 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 K7EMI3 77 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 INSP01308 110 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 SMIM13P0DJ93 91 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 FGF6P10767 208 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 RPL7P18124 248 aaKnown RBP2.29□□□□□ -2.04
VPS13B-208ENST00000521037 ORM2P19652 201 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 CXCL5P42830 114 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 NMUP48645 174 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 DAZ2Q13117 558 aaKnown RBP2.29□□□□□ -2.04
VPS13B-208ENST00000521037 SPINK13Q1W4C9 94 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 SDIM1Q6ZPB5 146 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 C2orf91Q6ZV80 131 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 MRAP2Q96G30 205 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 SHANK2-AS3Q9BTD1 123 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 CNFNQ9BYD5 112 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 MAP1LC3AQ9H492 121 aa2.29□□□□□ -2.04
VPS13B-208ENST00000521037 DAZ3Q9NR90 486 aaKnown RBP2.29□□□□□ -2.04
VPS13B-208ENST00000521037 TIMM8BQ9Y5J9 83 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-208ENST00000521037 SMIM26A0A096LP01 95 aa2.28□□□□□ -2.04
VPS13B-208ENST00000521037 TRAV8-2A0A0B4J237 113 aa2.28□□□□□ -2.04
VPS13B-208ENST00000521037 A0A1B0GV72 72 aa2.28□□□□□ -2.04
VPS13B-208ENST00000521037 TMEM238C9JI98 176 aa2.28□□□□□ -2.04
VPS13B-208ENST00000521037 H3BRN7 92 aa2.28□□□□□ -2.04
VPS13B-208ENST00000521037 NDUFS5O43920 106 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms