RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 C7orf77A4D0Y5 90 aa3.47□□□□□ -1.85
PABPC1-216ENST00000520868 C1orf196B1AJZ1 125 aa3.47□□□□□ -1.85
PABPC1-216ENST00000520868 GATCO43716 136 aaKnown RBP3.47□□□□□ -1.85
PABPC1-216ENST00000520868 APOMO95445 188 aa3.47□□□□□ -1.85
PABPC1-216ENST00000520868 POLR2KP53803 58 aaKnown RBP3.47□□□□□ -1.85
PABPC1-216ENST00000520868 MRPL52Q86TS9 123 aaKnown RBP3.47□□□□□ -1.85
PABPC1-216ENST00000520868 C5orf52A6NGY3 159 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 H0Y9J4 135 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 SMKR1H3BMG3 65 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 FCER1GP30273 86 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 RGS21Q2M5E4 152 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 Q6ZVH6 145 aa3.46□□□□□ -1.86
PABPC1-216ENST00000520868 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 TRBV27A0A0K0K1C4 114 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 A8MWL6 223 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 RAB4AP20338 218 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-216ENST00000520868 FAM19A5Q7Z5A7 132 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-216ENST00000520868 BORCS7Q96B45 105 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 BATF3Q9NR55 127 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
PABPC1-216ENST00000520868 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 TSPAN13O95857 204 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 UBE2D1P51668 147 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 CEBPGP53567 150 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 UBE2BP63146 152 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 SMAGPQ0VAQ4 97 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 UNQ6190/PRO20217Q6UXQ8 127 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 Q6ZUT4 128 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 TSKUQ8WUA8 353 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 ORAOV1Q8WV07 137 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 FAM210AQ96ND0 272 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 IMMP2LQ96T52 175 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 TMEM191AQ9H0A3 160 aa3.44□□□□□ -1.86
PABPC1-216ENST00000520868 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
PABPC1-216ENST00000520868 A0A1B0GUT8 65 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 HIGD1CA8MV81 97 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 NDUFA1O15239 70 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 TAGLN2P37802 199 aaKnown RBP3.43□□□□□ -1.86
PABPC1-216ENST00000520868 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 OR10D4PQ8NGN7 298 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
PABPC1-216ENST00000520868 CSDC2Q9Y534 153 aaKnown RBP3.43□□□□□ -1.86
PABPC1-216ENST00000520868 M0QXV9 152 aa3.42□□□□□ -1.86
PABPC1-216ENST00000520868 RPL39P62891 51 aaKnown RBP3.42□□□□□ -1.86
PABPC1-216ENST00000520868 TMEM241Q24JQ0 296 aa3.42□□□□□ -1.86
PABPC1-216ENST00000520868 IGHV3OR16-9A0A0B4J2B5 98 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 F8WDY8 70 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 TMEM250H0YL14 139 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 PPP1R17O96001 155 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 TLX1NBP0CAT3 122 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
PABPC1-216ENST00000520868 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
PABPC1-216ENST00000520868 SLC51BQ86UW2 128 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 SMDT1Q9H4I9 107 aa3.41□□□□□ -1.86
PABPC1-216ENST00000520868 CARHSP1Q9Y2V2 147 aaKnown RBP3.41□□□□□ -1.86
PABPC1-216ENST00000520868 PPP1R2P9O14990 202 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 ZNF861PO60384 105 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 C9orf129Q5T035 196 aaKnown RBP3.4□□□□□ -1.87
PABPC1-216ENST00000520868 FAM104BQ5XKR9 115 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 C2orf82Q6UX34 121 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 SMIM7Q9BQ49 75 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 OSTCQ9NRP0 149 aa3.4□□□□□ -1.87
PABPC1-216ENST00000520868 TGIF2-C20orf24A0A0A6YYL0 155 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 ZNF727A8MUV8 499 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 TCAPO15273 167 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 CKS2P33552 79 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 HBBP68871 147 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 LINC01551Q86U37 167 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 LINC00469Q8N7U9 141 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 PACRGQ96M98 296 aaPredicted RBP3.39□□□□□ -1.87
PABPC1-216ENST00000520868 C20orf78Q9BR46 151 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 EIF5A2Q9GZV4 153 aaKnown RBP3.39□□□□□ -1.87
PABPC1-216ENST00000520868 V9GYV3 84 aa3.39□□□□□ -1.87
PABPC1-216ENST00000520868 TRBV24-1A0A075B6N3 115 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 TRBV30A0A0K0K1B3 111 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 LINC00862A6NCI5 91 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 NDUFC2-KCTD14E9PQ53 114 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
PABPC1-216ENST00000520868 ALKAL2Q6UX46 152 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 RETNLBQ9BQ08 111 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 NAT8BQ9UHF3 227 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
PABPC1-216ENST00000520868 D6R8Y8 96 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 NUPR1O60356 82 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 NPYP01303 97 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 SRP19P09132 144 aaKnown RBP3.37□□□□□ -1.87
PABPC1-216ENST00000520868 IFI27P40305 119 aaPredicted RBP3.37□□□□□ -1.87
PABPC1-216ENST00000520868 RPL32P62910 135 aaKnown RBP3.37□□□□□ -1.87
PABPC1-216ENST00000520868 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 SMIM2Q9BVW6 85 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 XAGE1AQ9HD64 81 aa3.37□□□□□ -1.87
PABPC1-216ENST00000520868 TOMM7Q9P0U1 55 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms