RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
CSMD1-208ENST00000520561 LINC00526Q96FQ7 95 aa5.9□□□□□ -1.46
CSMD1-208ENST00000520561 ZNF625Q96I27 306 aaPredicted RBP5.9□□□□□ -1.46
CSMD1-208ENST00000520561 C2orf48Q96LS8 159 aa5.9□□□□□ -1.46
CSMD1-208ENST00000520561 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.47
CSMD1-208ENST00000520561 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 EREGO14944 169 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
CSMD1-208ENST00000520561 WFDC2Q14508 124 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 C2orf82Q6UX34 121 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 MIEN1Q9BRT3 115 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 TP73-AS1Q9UF72 201 aa5.89□□□□□ -1.47
CSMD1-208ENST00000520561 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 LRCOL1A6NCL2 159 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 TMEM238C9JI98 176 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
CSMD1-208ENST00000520561 A0A087WTM6 91 aa5.87□□□□□ -1.47
CSMD1-208ENST00000520561 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
CSMD1-208ENST00000520561 TIMM17BO60830 172 aa5.87□□□□□ -1.47
CSMD1-208ENST00000520561 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
CSMD1-208ENST00000520561 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
CSMD1-208ENST00000520561 Q6ZRU5 148 aa5.87□□□□□ -1.47
CSMD1-208ENST00000520561 ERG28Q9UKR5 140 aa5.87□□□□□ -1.47
CSMD1-208ENST00000520561 DNAH6Q9C0G6 4158 aa5.86□□□□□ -1.47
CSMD1-208ENST00000520561 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-208ENST00000520561 C10orf25Q5T742 122 aa5.86□□□□□ -1.47
CSMD1-208ENST00000520561 Q8N814 137 aa5.86□□□□□ -1.47
CSMD1-208ENST00000520561 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
CSMD1-208ENST00000520561 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
CSMD1-208ENST00000520561 A0A0U1RRA0 63 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 RTL8CO15255 209 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 GCSHP23434 173 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 DDTP30046 118 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 PFN2P35080 140 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 LINC00158P58513 81 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
CSMD1-208ENST00000520561 C2orf91Q6ZV80 131 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 PKIGQ9Y2B9 76 aa5.85□□□□□ -1.47
CSMD1-208ENST00000520561 TNP2Q05952 138 aa5.84□□□□□ -1.47
CSMD1-208ENST00000520561 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
CSMD1-208ENST00000520561 COX17Q14061 63 aa5.84□□□□□ -1.47
CSMD1-208ENST00000520561 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
CSMD1-208ENST00000520561 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
CSMD1-208ENST00000520561 HIST1H4GQ99525 98 aa5.84□□□□□ -1.47
CSMD1-208ENST00000520561 SPANXB1Q9NS25 103 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-208ENST00000520561 PCP4L1A6NKN8 68 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 HSD52Q0P140 79 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 TAL2Q16559 108 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 C9orf116Q5BN46 136 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-208ENST00000520561 LINC00336Q6ZUF6 198 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 Q6ZVH6 145 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 LITAFQ99732 161 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 SPANXCQ9NY87 97 aa5.83□□□□□ -1.48
CSMD1-208ENST00000520561 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
CSMD1-208ENST00000520561 LOC107984640A0A0U1RRK4 108 aa5.82□□□□□ -1.48
CSMD1-208ENST00000520561 NDUFC2-KCTD14E9PQ53 114 aa5.82□□□□□ -1.48
CSMD1-208ENST00000520561 SLPIP03973 132 aa5.82□□□□□ -1.48
CSMD1-208ENST00000520561 RPL18AQ02543 176 aaKnown RBP5.82□□□□□ -1.48
CSMD1-208ENST00000520561 DAND5Q8N907 189 aa5.82□□□□□ -1.48
CSMD1-208ENST00000520561 IGLV5-52A0A0A0MRZ9 124 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 M0R143 59 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 TLX1NBP0CAT3 122 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 IFITM1P13164 125 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 NPC2P61916 151 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 CTAG1AP78358 180 aa5.81□□□□□ -1.48
CSMD1-208ENST00000520561 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
CSMD1-208ENST00000520561 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
CSMD1-208ENST00000520561 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
CSMD1-208ENST00000520561 SACSQ9NZJ4 4579 aa5.8□□□□□ -1.48
CSMD1-208ENST00000520561 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 A6NJY4 79 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
CSMD1-208ENST00000520561 GAGE2BQ13066 116 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 Q6ZRP5 223 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 CEND1Q8N111 149 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 SND1-IT1Q9HBX3 110 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 DNAH10Q8IVF4 4471 aa5.79□□□□□ -1.48
CSMD1-208ENST00000520561 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
CSMD1-208ENST00000520561 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
CSMD1-208ENST00000520561 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
CSMD1-208ENST00000520561 C16orf90A8MZG2 172 aa5.77□□□□□ -1.49
CSMD1-208ENST00000520561 HINT1P49773 126 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-208ENST00000520561 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
CSMD1-208ENST00000520561 XAGE1AQ9HD64 81 aa5.77□□□□□ -1.49
CSMD1-208ENST00000520561 PGPEP1Q9NXJ5 209 aa5.77□□□□□ -1.49
CSMD1-208ENST00000520561 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 A0A096LNI7 61 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 IGKV2-24A0A0C4DH68 120 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 LOC107984156A0A0G2JMH3 177 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 A4D1N5 150 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 FXYD2P54710 66 aa5.76□□□□□ -1.49
CSMD1-208ENST00000520561 BATFQ16520 125 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms