RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 POLR2KP53803 58 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 PYDC2Q56P42 97 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 HRCT1Q6UXD1 115 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 LINC01551Q86U37 167 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 FMC1Q96HJ9 113 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 VCX3AQ9NNX9 186 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 TMEM167BQ9NRX6 74 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 DEDD2Q8WXF8 326 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 HIST1H2BAQ96A08 127 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 SMIM3Q9BZL3 60 aa3.1□□□□□ -1.91
CTNNA1-216ENST00000519489 TRGC1P0CF51 173 aa3.09□□□□□ -1.91
CTNNA1-216ENST00000519489 VPREB1P12018 145 aa3.09□□□□□ -1.91
CTNNA1-216ENST00000519489 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CTNNA1-216ENST00000519489 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
CTNNA1-216ENST00000519489 Q9H521 79 aa3.09□□□□□ -1.91
CTNNA1-216ENST00000519489 A0A0G2JQZ4 141 aa3.08□□□□□ -1.92
CTNNA1-216ENST00000519489 FAM236DA0A1B0GTK5 79 aa3.08□□□□□ -1.92
CTNNA1-216ENST00000519489 CXorf1O96002 111 aa3.08□□□□□ -1.92
CTNNA1-216ENST00000519489 FAM236CP0DP71 79 aa3.08□□□□□ -1.92
CTNNA1-216ENST00000519489 ATP11AUNQ6ZP68 121 aa3.08□□□□□ -1.92
CTNNA1-216ENST00000519489 TRBV20-1A0A075B6N2 111 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 TRBV27A0A0K0K1C4 114 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 KRTAP16-1A8MUX0 517 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 HRES1P13985 223 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 BTCP35070 178 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 AKR1C3P42330 323 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 RPL39P62891 51 aaKnown RBP3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 Q6ZVH6 145 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 Q75L30 129 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 ALKBH7Q9BT30 221 aaPredicted RBP3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 TOMM7Q9P0U1 55 aa3.07□□□□□ -1.92
CTNNA1-216ENST00000519489 FHITP49789 147 aa3.06□□□□□ -1.92
CTNNA1-216ENST00000519489 C6orf99Q4VX62 202 aa3.06□□□□□ -1.92
CTNNA1-216ENST00000519489 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
CTNNA1-216ENST00000519489 SEC22CQ9BRL7 303 aa3.06□□□□□ -1.92
CTNNA1-216ENST00000519489 TIMM21Q9BVV7 248 aa3.06□□□□□ -1.92
CTNNA1-216ENST00000519489 A0A087WXM4 84 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 TGIF2-C20orf24A0A0A6YYL0 155 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 RAB19A4D1S5 217 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 IFNA1P01562 189 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 CKS1BP61024 79 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 STOML3Q8TAV4 291 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 ST20Q9HBF5 79 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 HSPB11Q9Y547 144 aa3.05□□□□□ -1.92
CTNNA1-216ENST00000519489 F8VRH5 84 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 SIX6O95475 246 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 SMAGPQ0VAQ4 97 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 C6orf226Q5I0X4 101 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 C9orf153Q5TBE3 101 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 CST9LP1Q5W188 147 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 BAGE2Q86Y30 109 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 Q8IZM0 81 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 LIMD2Q9BT23 127 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 NKX6-2Q9C056 277 aaPredicted RBP3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 ACTR3CQ9C0K3 210 aaPredicted RBP3.04□□□□□ -1.92
CTNNA1-216ENST00000519489 NAP1L6A6NFF2 107 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 A8MWP4 228 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 F2Z2F3 143 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 H7C2G1 150 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 ATP6V0CP27449 155 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 FCER1GP30273 86 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 RAB5BP61020 215 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 Q1RN00 199 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 C9orf62Q8N4C0 152 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 CNFNQ9BYD5 112 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 V9GYH0 126 aa3.03□□□□□ -1.92
CTNNA1-216ENST00000519489 FXYD6-FXYD2A0A087WZ82 144 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 CCDC160A6NGH7 325 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 MT4P47944 62 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 TEX261Q6UWH6 196 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 SMIM29Q86T20 159 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 AKAP14Q86UN6 197 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
CTNNA1-216ENST00000519489 SMKR1H3BMG3 65 aa3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 MBP02144 154 aa3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 SPRR1AP35321 89 aa3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 HBBP68871 147 aa3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 MRPS36P82909 103 aaKnown RBP3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 SMIM15Q7Z3B0 74 aa3.01□□□□□ -1.93
CTNNA1-216ENST00000519489 LOC107984156A0A0G2JMH3 177 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 CENPXA8MT69 81 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 S100A9P06702 114 aaKnown RBP3□□□□□ -1.93
CTNNA1-216ENST00000519489 PCP4P48539 62 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 Q5VV11 94 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 TRIQKQ629K1 86 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 ARL17AQ8IVW1 177 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 FAM210AQ96ND0 272 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 Q9BRP9 147 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms