RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 KRTAP4-16G5E9R7 235 aaPredicted RBP4.98□□□□□ -1.61
CLK4-202ENST00000519132 USMG5Q96IX5 58 aa4.98□□□□□ -1.61
CLK4-202ENST00000519132 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
CLK4-202ENST00000519132 MRPL36Q9P0J6 103 aaKnown RBP4.98□□□□□ -1.61
CLK4-202ENST00000519132 HIVEP2P31629 2446 aa4.98□□□□□ -1.61
CLK4-202ENST00000519132 HIVEP1P15822 2718 aa4.98□□□□□ -1.61
CLK4-202ENST00000519132 CKS2P33552 79 aa4.97□□□□□ -1.61
CLK4-202ENST00000519132 ATXN8Q156A1 80 aa4.97□□□□□ -1.61
CLK4-202ENST00000519132 FCER1GP30273 86 aa4.97□□□□□ -1.61
CLK4-202ENST00000519132 C15orf32Q32M92 178 aa4.97□□□□□ -1.61
CLK4-202ENST00000519132 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
CLK4-202ENST00000519132 SONP18583 2426 aaKnown RBP4.97□□□□□ -1.61
CLK4-202ENST00000519132 RNASE4P34096 147 aaKnown RBP4.97□□□□□ -1.61
CLK4-202ENST00000519132 ZNF414Q96IQ9 312 aa4.97□□□□□ -1.61
CLK4-202ENST00000519132 SETXQ7Z333 2677 aaKnown RBP4.96□□□□□ -1.61
CLK4-202ENST00000519132 IGKV2D-26A0A0A0MRZ7 120 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 A6NN06 94 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 NDUFC1O43677 76 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 IGKV1-17P01599 117 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 TRGV3P03979 118 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 SLC25A29Q8N8R3 303 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 TRAV13-2A0A0B4J235 113 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 CYSRT1A8MQ03 144 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 UBE2AP49459 152 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 SFTA2Q6UW10 78 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 ZNF355PQ9NSJ1 428 aa4.96□□□□□ -1.62
CLK4-202ENST00000519132 H7C423 109 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 PSPHP1O15172 72 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 CTSGP08311 255 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 Q1T7F1 81 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 C2orf82Q6UX34 121 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 IGHV6-1A0A0B4J1U7 121 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 ESRGQ1W209 222 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
CLK4-202ENST00000519132 MRPL35Q9NZE8 188 aaKnown RBP4.95□□□□□ -1.62
CLK4-202ENST00000519132 IGHV3-21A0A0B4J1V1 117 aa4.94□□□□□ -1.62
CLK4-202ENST00000519132 COX7A2P2O60397 106 aa4.94□□□□□ -1.62
CLK4-202ENST00000519132 ATP11AUNQ6ZP68 121 aa4.94□□□□□ -1.62
CLK4-202ENST00000519132 S100A4P26447 101 aaKnown RBP4.94□□□□□ -1.62
CLK4-202ENST00000519132 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
CLK4-202ENST00000519132 IFI27P40305 119 aaPredicted RBP4.94□□□□□ -1.62
CLK4-202ENST00000519132 PATE2Q6UY27 113 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 LINC01006Q8NI28 216 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 TTTY13Q9BZ97 58 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 FN1P02751 2386 aaKnown RBP4.93□□□□□ -1.62
CLK4-202ENST00000519132 CUBNO60494 3623 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 AGRNO00468 2067 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 C10orf113Q5VZT2 155 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
CLK4-202ENST00000519132 S4R3C0 116 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 MAST4O15021 2626 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 F8P00451 2351 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 MTORP42345 2549 aa4.93□□□□□ -1.62
CLK4-202ENST00000519132 C10orf99Q6UWK7 81 aa4.92□□□□□ -1.62
CLK4-202ENST00000519132 NDUFA4O00483 81 aa4.92□□□□□ -1.62
CLK4-202ENST00000519132 CLEC2BQ92478 149 aa4.92□□□□□ -1.62
CLK4-202ENST00000519132 CLPSL1A2RUU4 121 aa4.92□□□□□ -1.62
CLK4-202ENST00000519132 H3BRN7 92 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 BCE1O60756 84 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 PRM2P04554 102 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 MIR17HGQ75NE6 70 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 FAM167A-AS1Q96KT0 104 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 LYZP61626 148 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 Q6JHZ5 121 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 C4orf3Q8WVX3 66 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 TMEM14CQ9P0S9 112 aa4.91□□□□□ -1.62
CLK4-202ENST00000519132 ARL14EPLP0DKL9 152 aa4.9□□□□□ -1.62
CLK4-202ENST00000519132 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.62
CLK4-202ENST00000519132 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 F8WEM9 126 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 IGHV3-11P01762 117 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 C18orf65Q6ZTR6 163 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 TIMM8BQ9Y5J9 83 aaPredicted RBP4.9□□□□□ -1.63
CLK4-202ENST00000519132 C9orf129Q5T035 196 aaKnown RBP4.9□□□□□ -1.63
CLK4-202ENST00000519132 PRO1854Q9UHT4 67 aa4.9□□□□□ -1.63
CLK4-202ENST00000519132 NF1P21359 2839 aa4.89□□□□□ -1.63
CLK4-202ENST00000519132 LINC00269Q8N2A0 174 aa4.89□□□□□ -1.63
CLK4-202ENST00000519132 DAND5Q8N907 189 aa4.89□□□□□ -1.63
CLK4-202ENST00000519132 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
CLK4-202ENST00000519132 IGLV2-8P01709 118 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 CD28P10747 220 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 PDE6HQ13956 83 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
CLK4-202ENST00000519132 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 A0A096LNJ9 63 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 Q1RN00 199 aa4.88□□□□□ -1.63
CLK4-202ENST00000519132 LYPD1Q8N2G4 141 aa4.87□□□□□ -1.63
CLK4-202ENST00000519132 TRAV7A0A075B6U4 112 aa4.87□□□□□ -1.63
CLK4-202ENST00000519132 IGHV7-4-1A0A0J9YVY3 117 aa4.87□□□□□ -1.63
CLK4-202ENST00000519132 TMEM223A0PJW6 202 aa4.86□□□□□ -1.63
CLK4-202ENST00000519132 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
CLK4-202ENST00000519132 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
CLK4-202ENST00000519132 C2CD3Q4AC94 2353 aa4.86□□□□□ -1.63
CLK4-202ENST00000519132 DYNLRB2Q8TF09 96 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms