RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PRADC1Q9BSG0 188 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 OSTCQ9NRP0 149 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 UBE2D4Q9Y2X8 147 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A1B0GV72 72 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 J3QLW9 94 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 FXYD1O00168 92 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARPC4P59998 168 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 GNGT1P63211 74 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SUPT4H1P63272 117 aaKnown RBP2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM15Q7Z3B0 74 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 BPIFA4PQ86YQ2 179 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 MRPL36Q9P0J6 103 aaKnown RBP2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM31A0A1B0GVY4 71 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 C7orf71A4D174 169 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TMEM212A6NML5 194 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TMEM262E9PQX1 116 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 H3BRN7 92 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 M0R129 80 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 ANGP03950 147 aaKnown RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 TRGC1P0CF51 173 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 KHDC3LQ587J8 217 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 CLVS1Q8IUQ0 354 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 MAFIPQ8WZ33 124 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 SLC50A1Q9BRV3 221 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 FKBP11Q9NYL4 201 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 LAMTOR3Q9UHA4 124 aa2.2□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A087WWC5 75 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 LOC105371267A0A1B0GV96 52 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CORTO00230 105 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 MT2AP02795 61 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CATR1Q13166 79 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 RHEBQ15382 184 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 RHOHQ15669 191 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 SPANXN5Q5MJ07 72 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 EIF5AL1Q6IS14 154 aaKnown RBP2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 CLPSL2Q6UWE3 100 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 TSKUQ8WUA8 353 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 HIST1H2BLQ99880 126 aa2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 HOPXQ9BPY8 73 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P23-201ENST00000518743 DUXBA0A1W2PPF3 345 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 MT1FP04733 61 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 IGLC1P0CG04 106 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 SPRR2DP22532 72 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 GNG5P63218 68 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARPINQ7Z6K5 226 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 CANT1Q8WVQ1 401 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
HMGB1P23-201ENST00000518743 BBIP1A8MTZ0 92 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 PMP2P02689 132 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 CROCCP2Q86T23 111 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 IFT20Q8IY31 132 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 NUP35Q8NFH5 326 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 OR5A1Q8NGJ0 315 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 ARHGAP5-AS1Q96IT6 56 aa2.17□□□□□ -2.06
HMGB1P23-201ENST00000518743 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 C1orf196B1AJZ1 125 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 QRFPP83859 136 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 LCN15Q6UWW0 184 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 LINC00299Q6ZSB3 139 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 ZNF431Q8TF32 576 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 TIMM21Q9BVV7 248 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 SAR1AQ9NR31 198 aa2.16□□□□□ -2.06
HMGB1P23-201ENST00000518743 SLC25A5P05141 298 aaKnown RBP2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBBP0CG47 229 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 RAB5CP51148 216 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 SLC38A11Q08AI6 406 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 ZNF345Q14585 488 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 PLEKHB2Q96CS7 222 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 NDUFA12Q9UI09 145 aa2.15□□□□□ -2.07
HMGB1P23-201ENST00000518743 PNMA8CA0A1B0GUJ8 204 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 SLC25A4P12235 298 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 MBD3L1Q8WWY6 194 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 PDCD10Q9BUL8 212 aa2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
HMGB1P23-201ENST00000518743 TRBV6-4A0A1B0GX49 114 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GPR31O00270 319 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GNGT2O14610 69 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 PGLYRP1O75594 196 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 GPX1P07203 203 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 BAALC-AS2P0C853 105 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 AKR1C3P42330 323 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 AQP4P55087 323 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 FXYD4P59646 89 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 DEFA3P59666 94 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBE2D3P61077 147 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 UBE2BP63146 152 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms