RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TEN1Q86WV5 123 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 TOMM6Q96B49 74 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 C2orf48Q96LS8 159 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 PRELID3AQ96N28 172 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 SLC50A1Q9BRV3 221 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 TP53TG3Q9ULZ0 132 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 LOC100131303A0A0U1RQF7 123 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 ATOX1O00244 68 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 PSPHP1O15172 72 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 PSCAO43653 123 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV3-53P01767 116 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 IAPPP10997 89 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 CRISP2P16562 243 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 CYCSP99999 105 aaKnown RBP3.9□□□□□ -1.79
PABPC1-207ENST00000518716 Q6ZQT7 251 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 TOMM5Q8N4H5 51 aa3.9□□□□□ -1.79
PABPC1-207ENST00000518716 MUC21A0A0G2JKD1 596 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 TRBV27A0A0K0K1C4 114 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 MUC21A0A140T8X8 626 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 H3BP45 60 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 SYNGR2O43760 224 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 CXCL1P09341 107 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 FAUP35544 74 aaKnown RBP3.89□□□□□ -1.79
PABPC1-207ENST00000518716 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 MUC21Q5SSG8 566 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 PRR9Q5T870 116 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 ZFAND2AQ8N6M9 145 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 HIST1H4GQ99525 98 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 LPAP08519 4548 aa3.89□□□□□ -1.79
PABPC1-207ENST00000518716 H3BUT2 72 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 LINC00479Q96M42 142 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 C20orf78Q9BR46 151 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 TXNDC17Q9BRA2 123 aa3.88□□□□□ -1.79
PABPC1-207ENST00000518716 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 TRBV20OR9-2A0A075B6H5 130 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 TRGV4A0A0C4DH28 118 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 M0R3E3 92 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 TCRAP04437 139 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 ACYP1P07311 99 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 SMIM13P0DJ93 91 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
PABPC1-207ENST00000518716 BTCP35070 178 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 MP68P56378 58 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
PABPC1-207ENST00000518716 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 SPANXN5Q5MJ07 72 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 C9orf47Q6ZRZ4 202 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
PABPC1-207ENST00000518716 SH2D6Q7Z4S9 175 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 AMN1Q8IY45 258 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 SMIM4Q8WVI0 70 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
PABPC1-207ENST00000518716 PIGBOS1A0A0B4J2F0 54 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 A8MWL6 223 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 C9JCJ5 164 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 E9PLD3 99 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 LECT2O14960 151 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 HLA-DQA1P01909 254 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 KRTDAPP60985 99 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 RPL37AP61513 92 aaKnown RBP3.86□□□□□ -1.79
PABPC1-207ENST00000518716 CXCL6P80162 114 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 LCA10Q71F78 164 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 GTSF1Q8WW33 167 aa3.86□□□□□ -1.79
PABPC1-207ENST00000518716 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
PABPC1-207ENST00000518716 UBE2L5PA0A1B0GUS4 154 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 A0A1B0GW54 56 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 IGKCP01834 107 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV3-30-3P0DP02 117 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 UBE2L3P68036 154 aaKnown RBP3.85□□□□□ -1.79
PABPC1-207ENST00000518716 HBBP68871 147 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 LELP1Q5T871 98 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 Q8N976 141 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 URB1-AS1Q96HZ7 61 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 ZNF492Q9P255 531 aa3.85□□□□□ -1.79
PABPC1-207ENST00000518716 RBAKDNA6NC62 111 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 CACNG7P62955 275 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 PDE6HQ13956 83 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 KIAA0087Q14695 138 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 C10orf113Q5VZT2 155 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 OR5C1Q8NGR4 320 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 TSKUQ8WUA8 353 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
PABPC1-207ENST00000518716 IGKV2-40A0A087WW87 121 aaPredicted RBP3.83□□□□□ -1.8
PABPC1-207ENST00000518716 M0R381 172 aa3.83□□□□□ -1.8
PABPC1-207ENST00000518716 LST1O00453 97 aa3.83□□□□□ -1.8
PABPC1-207ENST00000518716 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
PABPC1-207ENST00000518716 IGKV2D-40P01614 121 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms