RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
PABPC1-205ENST00000518196 C2orf48Q96LS8 159 aa8.47□□□□□ -1.05
PABPC1-205ENST00000518196 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
PABPC1-205ENST00000518196 C20orf202A1L168 122 aa8.46□□□□□ -1.06
PABPC1-205ENST00000518196 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
PABPC1-205ENST00000518196 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
PABPC1-205ENST00000518196 LINC00526Q96FQ7 95 aa8.46□□□□□ -1.06
PABPC1-205ENST00000518196 PMCHL2Q9BQD1 86 aa8.46□□□□□ -1.06
PABPC1-205ENST00000518196 FUSP35637 526 aaKnown RBP eCLIP8.45□□□□□ -1.06
PABPC1-205ENST00000518196 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
PABPC1-205ENST00000518196 C6orf226Q5I0X4 101 aa8.45□□□□□ -1.06
PABPC1-205ENST00000518196 Q8IZM0 81 aa8.45□□□□□ -1.06
PABPC1-205ENST00000518196 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
PABPC1-205ENST00000518196 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 C16orf90A8MZG2 172 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 NDUFA1O15239 70 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 AKR1D1P51857 326 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 COX7B2Q8TF08 81 aa8.44□□□□□ -1.06
PABPC1-205ENST00000518196 SLPIP03973 132 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 GCSHP23434 173 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 CKS1BP61024 79 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 HERVK_113P61574 105 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 KRTAP4-12Q9BQ66 201 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
PABPC1-205ENST00000518196 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
PABPC1-205ENST00000518196 CXCL5P42830 114 aa8.42□□□□□ -1.06
PABPC1-205ENST00000518196 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
PABPC1-205ENST00000518196 HECTD4Q9Y4D8 3996 aa8.41□□□□□ -1.06
PABPC1-205ENST00000518196 Q6ZRU5 148 aa8.41□□□□□ -1.06
PABPC1-205ENST00000518196 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
PABPC1-205ENST00000518196 PTTG1IPP53801 180 aa8.4□□□□□ -1.06
PABPC1-205ENST00000518196 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
PABPC1-205ENST00000518196 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
PABPC1-205ENST00000518196 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
PABPC1-205ENST00000518196 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
PABPC1-205ENST00000518196 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
PABPC1-205ENST00000518196 LEPROTO15243 131 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 DNAH11Q96DT5 4516 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 PKD1P98161 4303 aa8.38□□□□□ -1.07
PABPC1-205ENST00000518196 SCGB1D1O95968 90 aa8.37□□□□□ -1.07
PABPC1-205ENST00000518196 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
PABPC1-205ENST00000518196 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
PABPC1-205ENST00000518196 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
PABPC1-205ENST00000518196 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
PABPC1-205ENST00000518196 E9PLD3 99 aa8.35□□□□□ -1.07
PABPC1-205ENST00000518196 J3QQQ9 107 aa8.35□□□□□ -1.07
PABPC1-205ENST00000518196 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
PABPC1-205ENST00000518196 ATOH7Q8N100 152 aa8.35□□□□□ -1.07
PABPC1-205ENST00000518196 STPG4Q8N801 248 aa8.35□□□□□ -1.07
PABPC1-205ENST00000518196 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
PABPC1-205ENST00000518196 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-205ENST00000518196 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
PABPC1-205ENST00000518196 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
PABPC1-205ENST00000518196 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
PABPC1-205ENST00000518196 NMUP48645 174 aa8.33□□□□□ -1.08
PABPC1-205ENST00000518196 RPL18AQ02543 176 aaKnown RBP8.33□□□□□ -1.08
PABPC1-205ENST00000518196 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-205ENST00000518196 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-205ENST00000518196 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
PABPC1-205ENST00000518196 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
PABPC1-205ENST00000518196 HERV-K104P63124 156 aa8.32□□□□□ -1.08
PABPC1-205ENST00000518196 GAGE2BQ13066 116 aa8.32□□□□□ -1.08
PABPC1-205ENST00000518196 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
PABPC1-205ENST00000518196 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
PABPC1-205ENST00000518196 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
PABPC1-205ENST00000518196 TSPEAR-AS2P59090 65 aa8.31□□□□□ -1.08
PABPC1-205ENST00000518196 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-205ENST00000518196 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 A0A096LNI7 61 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 IGKV2-24A0A0C4DH68 120 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 COX17Q14061 63 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 ERG28Q9UKR5 140 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
PABPC1-205ENST00000518196 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 PFN2P35080 140 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 Q6ZRP5 223 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 Q6ZSA8 131 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
PABPC1-205ENST00000518196 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
PABPC1-205ENST00000518196 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
PABPC1-205ENST00000518196 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
PABPC1-205ENST00000518196 LINC00158P58513 81 aa8.27□□□□□ -1.09
PABPC1-205ENST00000518196 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
PABPC1-205ENST00000518196 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
PABPC1-205ENST00000518196 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
PABPC1-205ENST00000518196 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
PABPC1-205ENST00000518196 DYNC1H1Q14204 4646 aaKnown RBP8.25□□□□□ -1.09
PABPC1-205ENST00000518196 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
PABPC1-205ENST00000518196 PANO1I0J062 215 aa8.25□□□□□ -1.09
PABPC1-205ENST00000518196 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms