RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PLNP26678 52 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 COX7B2Q8TF08 81 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 TOMM7Q9P0U1 55 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 C6orf48Q9UBA6 75 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
CLN8-202ENST00000517514 SYCNQ0VAF6 134 aa6.35□□□□□ -1.39
CLN8-202ENST00000517514 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
CLN8-202ENST00000517514 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
CLN8-202ENST00000517514 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
CLN8-202ENST00000517514 C16orf90A8MZG2 172 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 F8WDY8 70 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 PANO1I0J062 215 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 GCSHP23434 173 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 STPG4Q8N801 248 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
CLN8-202ENST00000517514 CARD19Q96LW7 228 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 CAMK2N2Q96S95 79 aa6.34□□□□□ -1.39
CLN8-202ENST00000517514 IGKV2D-26A0A0A0MRZ7 120 aa6.33□□□□□ -1.4
CLN8-202ENST00000517514 NDUFA1O15239 70 aa6.33□□□□□ -1.4
CLN8-202ENST00000517514 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
CLN8-202ENST00000517514 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
CLN8-202ENST00000517514 C6orf226Q5I0X4 101 aa6.33□□□□□ -1.4
CLN8-202ENST00000517514 E9PLD3 99 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 LEPROTO15243 131 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 PRSS2P07478 247 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 Q6ZSA8 131 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 FAT1Q14517 4588 aa6.32□□□□□ -1.4
CLN8-202ENST00000517514 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.31□□□□□ -1.4
CLN8-202ENST00000517514 C20orf202A1L168 122 aa6.31□□□□□ -1.4
CLN8-202ENST00000517514 CHTF8P0CG12 524 aa6.31□□□□□ -1.4
CLN8-202ENST00000517514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
CLN8-202ENST00000517514 A0A096LNI7 61 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 TRBV30A0A0K0K1B3 111 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 J3QQQ9 107 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 TLX1NBP0CAT3 122 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 CXCL5P42830 114 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 CKS1BP61024 79 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
CLN8-202ENST00000517514 JOSD1Q15040 202 aaPredicted RBP6.3□□□□□ -1.4
CLN8-202ENST00000517514 Q6ZRP5 223 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 TTTY13Q9BZ97 58 aa6.3□□□□□ -1.4
CLN8-202ENST00000517514 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 XGP55808 180 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 PYY3Q5JQD4 70 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 HERC2O95714 4834 aa6.29□□□□□ -1.4
CLN8-202ENST00000517514 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
CLN8-202ENST00000517514 HERVK_113P61574 105 aa6.28□□□□□ -1.4
CLN8-202ENST00000517514 HAMPP81172 84 aa6.28□□□□□ -1.4
CLN8-202ENST00000517514 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
CLN8-202ENST00000517514 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
CLN8-202ENST00000517514 PTTG1IPP53801 180 aa6.27□□□□□ -1.41
CLN8-202ENST00000517514 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
CLN8-202ENST00000517514 SPACA4Q8TDM5 124 aa6.27□□□□□ -1.41
CLN8-202ENST00000517514 IGKV2-24A0A0C4DH68 120 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 LOC105371267A0A1B0GV96 52 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
CLN8-202ENST00000517514 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
CLN8-202ENST00000517514 A0A0J9YXY3 114 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 LGALS3P17931 250 aaKnown RBP6.25□□□□□ -1.41
CLN8-202ENST00000517514 NMUP48645 174 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 AKR1D1P51857 326 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 RPL18AQ02543 176 aaKnown RBP6.25□□□□□ -1.41
CLN8-202ENST00000517514 GAGE2BQ13066 116 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 TP73-AS1Q9UF72 201 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
CLN8-202ENST00000517514 A0A087WYN8 130 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 A0A1W2PNN7 141 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 SMIM13P0DJ93 91 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 PFN2P35080 140 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 HERV-K104P63124 156 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 GAGE2EQ4V326 116 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 Q8NDZ9 215 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 LITAFQ99732 161 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 GAGE2DQ9UEU5 116 aa6.24□□□□□ -1.41
CLN8-202ENST00000517514 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 ADAMTSL4-AS1Q5T5F5 129 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 SFTA2Q6UW10 78 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 PLAC8Q9NZF1 115 aa6.23□□□□□ -1.41
CLN8-202ENST00000517514 ZNF815PA8K554 130 aa6.22□□□□□ -1.41
CLN8-202ENST00000517514 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
CLN8-202ENST00000517514 COX17Q14061 63 aa6.22□□□□□ -1.41
CLN8-202ENST00000517514 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
CLN8-202ENST00000517514 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
CLN8-202ENST00000517514 LINC00158P58513 81 aa6.21□□□□□ -1.42
CLN8-202ENST00000517514 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms