RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 FHL3Q13643 280 aa7.85□□□□□ -1.15
PCDHGA1-202ENST00000517417 M0QXV9 152 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 HIGD2AQ9BW72 106 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 TMEM256-PLSCR3K7ERE1 68 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 NDUFA7O95182 113 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 A0A096LNI7 61 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 LINC00643Q86TS7 51 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 SBSPONQ8IVN8 264 aa7.84□□□□□ -1.15
PCDHGA1-202ENST00000517417 TIMM17BO60830 172 aa7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 Q6Q795 121 aa7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 COX7BP24311 80 aa7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 HRNRQ86YZ3 2850 aaPredicted RBP7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 AMELXQ99217 191 aa7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 IBA57-AS1B1ANH7 110 aa7.83□□□□□ -1.16
PCDHGA1-202ENST00000517417 KLK5Q9Y337 293 aaPredicted RBP7.82□□□□□ -1.16
PCDHGA1-202ENST00000517417 KLK9Q2XQG4 91 aa7.82□□□□□ -1.16
PCDHGA1-202ENST00000517417 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
PCDHGA1-202ENST00000517417 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.81□□□□□ -1.16
PCDHGA1-202ENST00000517417 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
PCDHGA1-202ENST00000517417 CHCHD7Q9BUK0 85 aa7.81□□□□□ -1.16
PCDHGA1-202ENST00000517417 BRI3O95415 125 aa7.8□□□□□ -1.16
PCDHGA1-202ENST00000517417 KPRPQ5T749 579 aaPredicted RBP7.8□□□□□ -1.16
PCDHGA1-202ENST00000517417 LINC00959A0A1B0GUT2 108 aa7.8□□□□□ -1.16
PCDHGA1-202ENST00000517417 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
PCDHGA1-202ENST00000517417 CFAP46Q8IYW2 2715 aa7.79□□□□□ -1.16
PCDHGA1-202ENST00000517417 ATOX1O00244 68 aa7.79□□□□□ -1.16
PCDHGA1-202ENST00000517417 Q6ZSN1 163 aa7.79□□□□□ -1.16
PCDHGA1-202ENST00000517417 IGHV4-30-4P0DP06 118 aa7.78□□□□□ -1.16
PCDHGA1-202ENST00000517417 CD164L2Q6UWJ8 174 aa7.78□□□□□ -1.16
PCDHGA1-202ENST00000517417 CDC42SE2Q9NRR3 84 aa7.78□□□□□ -1.16
PCDHGA1-202ENST00000517417 COX6A2Q02221 97 aa7.78□□□□□ -1.16
PCDHGA1-202ENST00000517417 SYCNQ0VAF6 134 aa7.77□□□□□ -1.16
PCDHGA1-202ENST00000517417 C1orf158Q8N1D5 194 aa7.77□□□□□ -1.16
PCDHGA1-202ENST00000517417 FLNCQ14315 2725 aa7.77□□□□□ -1.16
PCDHGA1-202ENST00000517417 TRAV23DV6A0A075B6W5 121 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 LINC00242Q5T6M2 205 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 A0A0U1RQV1 116 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 NDUFB1O75438 58 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
PCDHGA1-202ENST00000517417 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 FAM19A5Q7Z5A7 132 aaPredicted RBP7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 V9GYY9 64 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 UQCRQO14949 82 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 LINC00694P0DN24 101 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 SCXQ7RTU7 201 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 IMUPQ9GZP8 106 aa7.76□□□□□ -1.17
PCDHGA1-202ENST00000517417 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
PCDHGA1-202ENST00000517417 A0A087WZ39 114 aa7.75□□□□□ -1.17
PCDHGA1-202ENST00000517417 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
PCDHGA1-202ENST00000517417 SMIM1B2RUZ4 78 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 LELP1Q5T871 98 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 H3BQ85 93 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 RETNQ9HD89 108 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 Q6ZQY7 126 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 Q9UF83 564 aa7.74□□□□□ -1.17
PCDHGA1-202ENST00000517417 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 UTP20O75691 2785 aaKnown RBP7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 H0Y9J4 135 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 BPY2O14599 106 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 PDE6GP18545 87 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 M0R2N4 97 aa7.73□□□□□ -1.17
PCDHGA1-202ENST00000517417 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 SMIM11BQ8TCY0 68 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 LITAFQ99732 161 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 VPS13CQ709C8 3753 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 CELSR1Q9NYQ6 3014 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 CYSRT1A8MQ03 144 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 UNQ6190/PRO20217Q6UXQ8 127 aa7.72□□□□□ -1.17
PCDHGA1-202ENST00000517417 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.17
PCDHGA1-202ENST00000517417 MP68P56378 58 aa7.71□□□□□ -1.17
PCDHGA1-202ENST00000517417 UPK3BQ9BT76 320 aa7.71□□□□□ -1.17
PCDHGA1-202ENST00000517417 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
PCDHGA1-202ENST00000517417 C14orf177Q52M58 125 aa7.71□□□□□ -1.18
PCDHGA1-202ENST00000517417 CCKP06307 115 aa7.7□□□□□ -1.18
PCDHGA1-202ENST00000517417 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
PCDHGA1-202ENST00000517417 B9D2Q9BPU9 175 aa7.7□□□□□ -1.18
PCDHGA1-202ENST00000517417 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
PCDHGA1-202ENST00000517417 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 NDUFC2O95298 119 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 C20orf197Q8N268 126 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 IL17DQ8TAD2 202 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 C3orf84H3BNL1 204 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 NHLRC4P0CG21 123 aaPredicted RBP7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 Q8N2B8 174 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 FHL2Q14192 279 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
PCDHGA1-202ENST00000517417 COX7CP15954 63 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms