RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 PAGE4O60829 102 aa6.62□□□□□ -1.35
SMAD1-216ENST00000515527 MPC2O95563 127 aa6.62□□□□□ -1.35
SMAD1-216ENST00000515527 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
SMAD1-216ENST00000515527 Q8IZM0 81 aa6.62□□□□□ -1.35
SMAD1-216ENST00000515527 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
SMAD1-216ENST00000515527 TMUB2Q71RG4 321 aa6.61□□□□□ -1.35
SMAD1-216ENST00000515527 AKAP14Q86UN6 197 aa6.61□□□□□ -1.35
SMAD1-216ENST00000515527 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
SMAD1-216ENST00000515527 Q6ZN92 141 aa6.6□□□□□ -1.35
SMAD1-216ENST00000515527 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
SMAD1-216ENST00000515527 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SMAD1-216ENST00000515527 MAP1LC3B2A6NCE7 125 aa6.59□□□□□ -1.35
SMAD1-216ENST00000515527 MRPS36P82909 103 aaKnown RBP6.59□□□□□ -1.35
SMAD1-216ENST00000515527 C9orf153Q5TBE3 101 aa6.59□□□□□ -1.35
SMAD1-216ENST00000515527 MAP1LC3BQ9GZQ8 125 aa6.59□□□□□ -1.35
SMAD1-216ENST00000515527 CHTOPQ9Y3Y2 248 aaKnown RBP6.59□□□□□ -1.35
SMAD1-216ENST00000515527 RPL35P42766 123 aaKnown RBP6.58□□□□□ -1.36
SMAD1-216ENST00000515527 NRACQ8N912 160 aa6.58□□□□□ -1.36
SMAD1-216ENST00000515527 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
SMAD1-216ENST00000515527 NDUFA13Q9P0J0 144 aa6.58□□□□□ -1.36
SMAD1-216ENST00000515527 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
SMAD1-216ENST00000515527 RAB5BP61020 215 aa6.57□□□□□ -1.36
SMAD1-216ENST00000515527 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
SMAD1-216ENST00000515527 LYRM1O43325 122 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 SPRR2EP22531 72 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 SPRR2BP35325 72 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 SPRR2AP35326 72 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 KIAA1644Q3SXP7 199 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 HRCT1Q6UXD1 115 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
SMAD1-216ENST00000515527 A6NN06 94 aa6.54□□□□□ -1.36
SMAD1-216ENST00000515527 H2BFSP57053 126 aa6.54□□□□□ -1.36
SMAD1-216ENST00000515527 MED9Q9NWA0 146 aa6.54□□□□□ -1.36
SMAD1-216ENST00000515527 FAM236DA0A1B0GTK5 79 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 PLA2G10O15496 165 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 ATP6V1G2O95670 118 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 FAM236CP0DP71 79 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 VPREB1P12018 145 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
SMAD1-216ENST00000515527 AKR1C8PQ5T2L2 129 aa6.53□□□□□ -1.36
SMAD1-216ENST00000515527 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
SMAD1-216ENST00000515527 SMKR1H3BMG3 65 aa6.52□□□□□ -1.37
SMAD1-216ENST00000515527 IL7P13232 177 aa6.52□□□□□ -1.37
SMAD1-216ENST00000515527 CXCL5P42830 114 aa6.52□□□□□ -1.37
SMAD1-216ENST00000515527 NOL3O60936 208 aaKnown RBP6.5□□□□□ -1.37
SMAD1-216ENST00000515527 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
SMAD1-216ENST00000515527 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
SMAD1-216ENST00000515527 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
SMAD1-216ENST00000515527 SLC51BQ86UW2 128 aa6.49□□□□□ -1.37
SMAD1-216ENST00000515527 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-216ENST00000515527 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
SMAD1-216ENST00000515527 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
SMAD1-216ENST00000515527 RAB4AP20338 218 aa6.48□□□□□ -1.37
SMAD1-216ENST00000515527 RAB14P61106 215 aa6.48□□□□□ -1.37
SMAD1-216ENST00000515527 A0A1B0GV50 99 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 LOC105371267A0A1B0GV96 52 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 PPP1R17O96001 155 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 TAGLN2P37802 199 aaKnown RBP6.47□□□□□ -1.37
SMAD1-216ENST00000515527 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
SMAD1-216ENST00000515527 GNG4P50150 75 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 S100A12P80511 92 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 BIN3Q9NQY0 253 aa6.47□□□□□ -1.37
SMAD1-216ENST00000515527 PPP1R2P9O14990 202 aa6.46□□□□□ -1.38
SMAD1-216ENST00000515527 GHRHP01286 108 aa6.46□□□□□ -1.38
SMAD1-216ENST00000515527 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.38
SMAD1-216ENST00000515527 AMN1Q8IY45 258 aa6.46□□□□□ -1.38
SMAD1-216ENST00000515527 TMEM191AQ9H0A3 160 aa6.46□□□□□ -1.38
SMAD1-216ENST00000515527 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 ETDCA0A1B0GVM5 59 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 PRSS47A8MTI9 375 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 TCAPO15273 167 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 RPL7L1Q6DKI1 246 aaKnown RBP6.45□□□□□ -1.38
SMAD1-216ENST00000515527 ENKURQ8TC29 256 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 SMIM12Q96EX1 92 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 TMEM141Q96I45 108 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
SMAD1-216ENST00000515527 FXYD6-FXYD2A0A087WZ82 144 aa6.44□□□□□ -1.38
SMAD1-216ENST00000515527 FAM240BA0A1B0GVZ2 78 aa6.44□□□□□ -1.38
SMAD1-216ENST00000515527 BORCS7-ASMTA0A0B4J1R7 106 aa6.43□□□□□ -1.38
SMAD1-216ENST00000515527 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
SMAD1-216ENST00000515527 KCNRGQ8N5I3 272 aa6.43□□□□□ -1.38
SMAD1-216ENST00000515527 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
SMAD1-216ENST00000515527 EIF5A2Q9GZV4 153 aaKnown RBP6.43□□□□□ -1.38
SMAD1-216ENST00000515527 A8MWL6 223 aa6.42□□□□□ -1.38
SMAD1-216ENST00000515527 PFN2P35080 140 aa6.42□□□□□ -1.38
SMAD1-216ENST00000515527 ZC2HC1BQ5TFG8 222 aa6.42□□□□□ -1.38
SMAD1-216ENST00000515527 Q8NDZ9 215 aa6.42□□□□□ -1.38
SMAD1-216ENST00000515527 GIPP09681 153 aaPredicted RBP6.41□□□□□ -1.38
SMAD1-216ENST00000515527 CCL20P78556 96 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 Q6ZVH6 145 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 SND1-IT1Q9HBX3 110 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
SMAD1-216ENST00000515527 PRYO14603 147 aa6.4□□□□□ -1.38
SMAD1-216ENST00000515527 C1orf195Q5TG92 126 aa6.4□□□□□ -1.38
SMAD1-216ENST00000515527 COX7B2Q8TF08 81 aa6.4□□□□□ -1.38
SMAD1-216ENST00000515527 PYGO1Q9Y3Y4 419 aa6.39□□□□□ -1.39
SMAD1-216ENST00000515527 SSNA1O43805 119 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms