RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	ATP5L	O75964	103 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	CHTF8	P0CG12	524 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	IGLC3	P0DOY3	106 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	HERVK_113	P63121	156 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	KIAA0087	Q14695	138 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	C10orf25	Q5T742	122 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452		Q6ZRU5	148 aa		4.99	□□□□□ -1.61
NR1I3-233	ENST00000515452	SMIM1	B2RUZ4	78 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	ZNF561-AS1	K7EIQ3	104 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	APOM	O95445	188 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	FABP4	P15090	132 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	ZNF22	P17026	224 aa	Predicted RBP	4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	SYCN	Q0VAF6	134 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	C2orf82	Q6UX34	121 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	SCX	Q7RTU7	201 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	LINC00469	Q8N7U9	141 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	OR10D4P	Q8NGN7	298 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	CARD19	Q96LW7	228 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	CAMK2N2	Q96S95	79 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	CHAC1	Q9BUX1	264 aa		4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	GEMIN7	Q9H840	131 aa	Known RBP	4.98	□□□□□ -1.61
NR1I3-233	ENST00000515452	LRP2	P98164	4655 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452		A0A096LNI7	61 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	C11orf86	A6NJI1	115 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	LEPROTL1	O95214	131 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	SPINK8	P0C7L1	97 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	SEC11A	P67812	179 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	LINC01561	Q8N1V8	128 aa		4.97	□□□□□ -1.61
NR1I3-233	ENST00000515452	TRAV12-1	A0A0B4J245	112 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452		H0Y8G0	127 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	CIRBP	Q14011	172 aa	Known RBP	4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	COA6	Q5JTJ3	125 aa	Known RBP	4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	CIRBP-AS1	Q8TBR5	109 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	C2orf48	Q96LS8	159 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	MRPL35	Q9NZE8	188 aa	Known RBP	4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	TOMM7	Q9P0U1	55 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	C6orf48	Q9UBA6	75 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	DNAH8	Q96JB1	4490 aa		4.96	□□□□□ -1.62
NR1I3-233	ENST00000515452	IGKV2-24	A0A0C4DH68	120 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	NDUFA1	O15239	70 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	ODF1	Q14990	250 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	C9orf116	Q5BN46	136 aa	Predicted RBP	4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452		Q8IZM0	81 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	SPACA4	Q8TDM5	124 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	PACRG	Q96M98	296 aa	Predicted RBP	4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452	PMCHL2	Q9BQD1	86 aa		4.95	□□□□□ -1.62
NR1I3-233	ENST00000515452		F8VRH5	84 aa		4.94	□□□□□ -1.62
NR1I3-233	ENST00000515452	TMEM170B	Q5T4T1	132 aa		4.94	□□□□□ -1.62
NR1I3-233	ENST00000515452	FAT3	Q8TDW7	4589 aa		4.94	□□□□□ -1.62
NR1I3-233	ENST00000515452		A0A087WYN8	130 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	IGLV5-39	A0A0G2JS06	123 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	PRSS2	P07478	247 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	GAGE2B	Q13066	116 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	RNF151	Q2KHN1	245 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	MAJIN	Q3KP22	176 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	COX7B2	Q8TF08	81 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	HSPB8	Q9UJY1	196 aa		4.93	□□□□□ -1.62
NR1I3-233	ENST00000515452	LOC107984640	A0A0U1RRK4	108 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	TMEM223	A0PJW6	202 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452		F8WDY8	70 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452		H3BRM9	83 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	PTTG1IP	P53801	180 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	RPL18A	Q02543	176 aa	Known RBP	4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	ANKRD39	Q53RE8	183 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	C6orf226	Q5I0X4	101 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452		Q6ZRP5	223 aa		4.92	□□□□□ -1.62
NR1I3-233	ENST00000515452	TRBV30	A0A0K0K1B3	111 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	SYS1-DBNDD2	H3BUS1	97 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	TLX1NB	P0CAT3	122 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	C3orf79	P0CE67	100 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	CKS1B	P61024	79 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	KRTAP7-1	Q8IUC3	87 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	STPG4	Q8N801	248 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452	PLAC8	Q9NZF1	115 aa		4.91	□□□□□ -1.62
NR1I3-233	ENST00000515452		A0A1W2PNN7	141 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	FAM168B	A1KXE4	195 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	TSPEAR-AS2	P59090	65 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	KRTAP10-4	P60372	401 aa	Predicted RBP	4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	GAGE2E	Q4V326	116 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	C9orf129	Q5T035	196 aa	Known RBP	4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	HIST3H2BB	Q8N257	126 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	MAP1LC3C	Q9BXW4	147 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	GAGE2D	Q9UEU5	116 aa		4.9	□□□□□ -1.63
NR1I3-233	ENST00000515452	NDUFC2-KCTD14	E9PQ53	114 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	DPM2	O94777	84 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	IGKC	P01834	107 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	CXCL5	P42830	114 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	LINC01545	Q5VT33	79 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	DPH3	Q96FX2	82 aa		4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	ZNF625	Q96I27	306 aa	Predicted RBP	4.89	□□□□□ -1.63
NR1I3-233	ENST00000515452	PLN	P26678	52 aa		4.88	□□□□□ -1.63
NR1I3-233	ENST00000515452	KRTDAP	P60985	99 aa		4.88	□□□□□ -1.63
NR1I3-233	ENST00000515452	HIST1H2BL	Q99880	126 aa		4.88	□□□□□ -1.63
NR1I3-233	ENST00000515452	XAGE1A	Q9HD64	81 aa		4.88	□□□□□ -1.63
NR1I3-233	ENST00000515452	SNRPE	P62304	92 aa	Known RBP	4.87	□□□□□ -1.63
NR1I3-233	ENST00000515452	PET117	Q6UWS5	81 aa		4.87	□□□□□ -1.63
NR1I3-233	ENST00000515452	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms