RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ATP5L2Q7Z4Y8 100 aa13.35□□□□□ -0.27
SMAD1-214ENST00000514831 LAMTOR2Q9Y2Q5 125 aa13.35□□□□□ -0.27
SMAD1-214ENST00000514831 F8VRH5 84 aa13.34□□□□□ -0.27
SMAD1-214ENST00000514831 NPSP0C0P6 89 aa13.34□□□□□ -0.27
SMAD1-214ENST00000514831 VCX2Q9H322 139 aa13.34□□□□□ -0.27
SMAD1-214ENST00000514831 MAP1LC3AQ9H492 121 aa13.33□□□□□ -0.28
SMAD1-214ENST00000514831 KRTAP13-2Q52LG2 175 aa13.32□□□□□ -0.28
SMAD1-214ENST00000514831 LOC389332A0A1B0GUA5 103 aa13.31□□□□□ -0.28
SMAD1-214ENST00000514831 RETNLBQ9BQ08 111 aa13.31□□□□□ -0.28
SMAD1-214ENST00000514831 CXCL5P42830 114 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 HERVK_113P63121 156 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
SMAD1-214ENST00000514831 TPRXLQ17RH7 258 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 Q8N8P6 123 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 LINC00167Q96N53 147 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 ANAPC11Q9NYG5 84 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 CDKN2A-AS1Q9UH64 79 aa13.3□□□□□ -0.28
SMAD1-214ENST00000514831 IGIPA6NJ69 53 aa13.29□□□□□ -0.28
SMAD1-214ENST00000514831 KRTAP13-1Q8IUC0 172 aa13.29□□□□□ -0.28
SMAD1-214ENST00000514831 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 SEC11AP67812 179 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 PEA15Q15121 130 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 FAM229BQ4G0N7 80 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 ORMDL2Q53FV1 153 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 LINC00304Q8N9R0 145 aa13.28□□□□□ -0.28
SMAD1-214ENST00000514831 CDIP1Q9H305 208 aa13.27□□□□□ -0.29
SMAD1-214ENST00000514831 K7EMI3 77 aa13.26□□□□□ -0.29
SMAD1-214ENST00000514831 GEMIN7Q9H840 131 aaKnown RBP13.25□□□□□ -0.29
SMAD1-214ENST00000514831 MUC17Q685J3 4493 aa13.25□□□□□ -0.29
SMAD1-214ENST00000514831 IGLV5-37A0A075B6J1 123 aa13.24□□□□□ -0.29
SMAD1-214ENST00000514831 UBE2AP49459 152 aa13.24□□□□□ -0.29
SMAD1-214ENST00000514831 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
SMAD1-214ENST00000514831 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
SMAD1-214ENST00000514831 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
SMAD1-214ENST00000514831 IGLV7-46A0A075B6I9 117 aa13.21□□□□□ -0.29
SMAD1-214ENST00000514831 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
SMAD1-214ENST00000514831 CTAG1AP78358 180 aa13.21□□□□□ -0.29
SMAD1-214ENST00000514831 TIMM17AQ99595 171 aa13.21□□□□□ -0.29
SMAD1-214ENST00000514831 PNRC1Q12796 327 aaPredicted RBP13.2□□□□□ -0.3
SMAD1-214ENST00000514831 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
SMAD1-214ENST00000514831 NXT2Q9NPJ8 142 aaKnown RBP13.19□□□□□ -0.3
SMAD1-214ENST00000514831 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
SMAD1-214ENST00000514831 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
SMAD1-214ENST00000514831 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
SMAD1-214ENST00000514831 G0S2P27469 103 aa13.16□□□□□ -0.3
SMAD1-214ENST00000514831 TOMM6Q96B49 74 aa13.16□□□□□ -0.3
SMAD1-214ENST00000514831 IGLV5-45A0A087WSX0 123 aa13.15□□□□□ -0.3
SMAD1-214ENST00000514831 IGKV2-28A0A075B6P5 120 aa13.14□□□□□ -0.31
SMAD1-214ENST00000514831 IGKV2D-28P01615 120 aa13.14□□□□□ -0.31
SMAD1-214ENST00000514831 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
SMAD1-214ENST00000514831 RAB5BP61020 215 aa13.12□□□□□ -0.31
SMAD1-214ENST00000514831 PRLHP81277 87 aa13.12□□□□□ -0.31
SMAD1-214ENST00000514831 ERASQ7Z444 233 aa13.12□□□□□ -0.31
SMAD1-214ENST00000514831 SCO1O75880 301 aa13.11□□□□□ -0.31
SMAD1-214ENST00000514831 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
SMAD1-214ENST00000514831 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
SMAD1-214ENST00000514831 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
SMAD1-214ENST00000514831 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
SMAD1-214ENST00000514831 SCGB3A1Q96QR1 104 aa13.08□□□□□ -0.32
SMAD1-214ENST00000514831 TMEM126AQ9H061 195 aa13.08□□□□□ -0.32
SMAD1-214ENST00000514831 ATP5LO75964 103 aa13.06□□□□□ -0.32
SMAD1-214ENST00000514831 MT-ND4LP03901 98 aa13.06□□□□□ -0.32
SMAD1-214ENST00000514831 ADCYAP1P18509 176 aa13.06□□□□□ -0.32
SMAD1-214ENST00000514831 C3orf22Q8N5N4 141 aa13.06□□□□□ -0.32
SMAD1-214ENST00000514831 TMEM238C9JI98 176 aa13.05□□□□□ -0.32
SMAD1-214ENST00000514831 VPREB1P12018 145 aa13.05□□□□□ -0.32
SMAD1-214ENST00000514831 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
SMAD1-214ENST00000514831 LINC01549A6NIU2 74 aa13.03□□□□□ -0.32
SMAD1-214ENST00000514831 SPAG11AQ6PDA7 123 aa13.03□□□□□ -0.32
SMAD1-214ENST00000514831 FP248Q71RG6 208 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-214ENST00000514831 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
SMAD1-214ENST00000514831 M0R378 163 aa13.02□□□□□ -0.33
SMAD1-214ENST00000514831 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
SMAD1-214ENST00000514831 PFN2P35080 140 aa13.01□□□□□ -0.33
SMAD1-214ENST00000514831 H3BRM9 83 aa13□□□□□ -0.33
SMAD1-214ENST00000514831 GNB1LQ9BYB4 327 aa13□□□□□ -0.33
SMAD1-214ENST00000514831 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
SMAD1-214ENST00000514831 PMVKQ15126 192 aa12.99□□□□□ -0.33
SMAD1-214ENST00000514831 KIAA1644Q3SXP7 199 aa12.99□□□□□ -0.33
SMAD1-214ENST00000514831 CBLN2Q8IUK8 224 aa12.99□□□□□ -0.33
SMAD1-214ENST00000514831 RPL24P83731 157 aaKnown RBP12.98□□□□□ -0.33
SMAD1-214ENST00000514831 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
SMAD1-214ENST00000514831 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
SMAD1-214ENST00000514831 KRTAP13-3Q3SY46 172 aa12.97□□□□□ -0.33
SMAD1-214ENST00000514831 ASB16-AS1Q495Z4 193 aa12.97□□□□□ -0.33
SMAD1-214ENST00000514831 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
SMAD1-214ENST00000514831 HIGD2AQ9BW72 106 aa12.96□□□□□ -0.33
SMAD1-214ENST00000514831 COX17Q14061 63 aa12.95□□□□□ -0.34
SMAD1-214ENST00000514831 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
SMAD1-214ENST00000514831 Q8NDZ9 215 aa12.95□□□□□ -0.34
SMAD1-214ENST00000514831 SPRR4Q96PI1 79 aa12.95□□□□□ -0.34
SMAD1-214ENST00000514831 LINC01547P58512 204 aaPredicted RBP12.94□□□□□ -0.34
SMAD1-214ENST00000514831 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
SMAD1-214ENST00000514831 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
SMAD1-214ENST00000514831 RAB14P61106 215 aa12.91□□□□□ -0.34
SMAD1-214ENST00000514831 C4orf48Q5BLP8 95 aa12.91□□□□□ -0.34
SMAD1-214ENST00000514831 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
SMAD1-214ENST00000514831 A0A1B0GVG6 124 aa12.89□□□□□ -0.35
SMAD1-214ENST00000514831 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
SMAD1-214ENST00000514831 ZNF22P17026 224 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms