RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-222	ENST00000514654	SS18L2	Q9UHA2	77 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	TRAV23DV6	A0A075B6W5	121 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	TEP1	Q99973	2627 aa	Known RBP	4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	C11orf72	Q8NBR9	251 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	AMELX	Q99217	191 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	CITED1	Q99966	193 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	LINC00315	P59091	139 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654		Q8IZM0	81 aa		4.38	□□□□□ -1.71
ATP2C1-222	ENST00000514654	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	LST1	O00453	97 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	NDUFB1	O75438	58 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	LY6G6C	O95867	125 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	LINC00643	Q86TS7	51 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	C6orf223	Q8N319	242 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	B9D2	Q9BPU9	175 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654		H0Y9J4	135 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	WFDC10B	Q8IUB3	73 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654	CELA1	Q9UNI1	258 aa		4.37	□□□□□ -1.71
ATP2C1-222	ENST00000514654		H3BQ85	93 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	SZT2	Q5T011	3432 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	BPY2	O14599	106 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	C3orf84	H3BNL1	204 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	ATOX1	O00244	68 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	FAM19A4	Q96LR4	140 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	AKAP13	Q12802	2813 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654		M0R378	163 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	CCK	P06307	115 aa		4.36	□□□□□ -1.71
ATP2C1-222	ENST00000514654	PDE6G	P18545	87 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	ZNF73	O43830	326 aa	Predicted RBP	4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	C4orf48	Q5BLP8	95 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	LYPD5	Q6UWN5	251 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	NTM-AS1	Q6ZSK4	140 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	UPK3B	Q9BT76	320 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	FHL3	Q13643	280 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	ENHO	Q6UWT2	76 aa		4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	CSDC2	Q9Y534	153 aa	Known RBP	4.35	□□□□□ -1.71
ATP2C1-222	ENST00000514654	TRBV10-3	A0A0K0K1G6	114 aa		4.34	□□□□□ -1.71
ATP2C1-222	ENST00000514654	FSHB	P01225	129 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	COX17	Q14061	63 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	USP17L23	D6RBM5	183 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	LOC107984640	A0A0U1RRK4	108 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654		A8MTW9	85 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	CELSR3	Q9NYQ7	3312 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	MP68	P56378	58 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	KRTAP24-1	Q3LI83	254 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654	SMIM20	Q8N5G0	67 aa		4.33	□□□□□ -1.72
ATP2C1-222	ENST00000514654		A0A1B0GUV1	79 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	NDUFV3	P56181	108 aa	Known RBP	4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	EGFEM1P	Q0D2K5	195 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	HRCT1	Q6UXD1	115 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654		A0A087WYN8	130 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	XG	P55808	180 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	C20orf197	Q8N268	126 aa		4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654	SETX	Q7Z333	2677 aa	Known RBP	4.32	□□□□□ -1.72
ATP2C1-222	ENST00000514654		Q8N3U1	123 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654	WFDC9	Q8NEX5	89 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654	CHD6	Q8TD26	2715 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654	VCAN	P13611	3396 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654		X6R8D5	127 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654	LAMA1	P25391	3075 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654	SPINK6	Q6UWN8	80 aa		4.31	□□□□□ -1.72
ATP2C1-222	ENST00000514654		M0QXV9	152 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	RPL28	P46779	137 aa	Known RBP	4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	IGLV9-49	A0A0B4J1Y8	123 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	PLAC8L1	A1L4L8	177 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654		Q6ZRU5	148 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	LINC00337	Q8N6G1	96 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654		A0A096LNT2	108 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	DHRS4-AS1	Q9P1J3	65 aa		4.3	□□□□□ -1.72
ATP2C1-222	ENST00000514654	ESRG	Q1W209	222 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654		Q8N814	137 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	LINC01546	A6NGU7	62 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	KLK9	Q2XQG4	91 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	SBSPON	Q8IVN8	264 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	C7orf33	Q8WU49	177 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	TEX15	Q9BXT5	2789 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	NUPR2	A6NF83	97 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	NDUFC2-KCTD14	E9PQ53	114 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	IGKV4-1	P06312	121 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	WFDC13	Q8IUB5	93 aa		4.29	□□□□□ -1.72
ATP2C1-222	ENST00000514654	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.28	□□□□□ -1.72
ATP2C1-222	ENST00000514654	STAB1	Q9NY15	2570 aa		4.28	□□□□□ -1.72
ATP2C1-222	ENST00000514654	FRY	Q5TBA9	3013 aa		4.28	□□□□□ -1.72
ATP2C1-222	ENST00000514654	IGLV5-39	A0A0G2JS06	123 aa		4.28	□□□□□ -1.72
ATP2C1-222	ENST00000514654	C5orf47	Q569G3	176 aa		4.28	□□□□□ -1.72
ATP2C1-222	ENST00000514654	DNAH14	Q0VDD8	3507 aa		4.27	□□□□□ -1.73
ATP2C1-222	ENST00000514654	TMEM258	P61165	79 aa		4.27	□□□□□ -1.73
ATP2C1-222	ENST00000514654	MUC7	Q8TAX7	377 aa		4.27	□□□□□ -1.73
ATP2C1-222	ENST00000514654	FREM2	Q5SZK8	3169 aa		4.27	□□□□□ -1.73
ATP2C1-222	ENST00000514654	C10orf25	Q5T742	122 aa		4.27	□□□□□ -1.73
ATP2C1-222	ENST00000514654		A0A087WVE0	104 aa		4.26	□□□□□ -1.73
ATP2C1-222	ENST00000514654	CHKB-CPT1B	H3BT56	60 aa		4.26	□□□□□ -1.73
ATP2C1-222	ENST00000514654	ATP5EP2	Q5VTU8	51 aa		4.26	□□□□□ -1.73
ATP2C1-222	ENST00000514654	IGSF10	Q6WRI0	2623 aa		4.26	□□□□□ -1.73
ATP2C1-222	ENST00000514654	SOSTDC1	Q6X4U4	206 aa		4.26	□□□□□ -1.73
ATP2C1-222	ENST00000514654	UQCRQ	O14949	82 aa		4.25	□□□□□ -1.73
ATP2C1-222	ENST00000514654	REG3G	Q6UW15	175 aa		4.25	□□□□□ -1.73
ATP2C1-222	ENST00000514654		Q8NAQ8	132 aa		4.25	□□□□□ -1.73
ATP2C1-222	ENST00000514654	SNURF	Q9Y675	71 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms