RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RBMY1BA6NDE4 496 aaKnown RBP5.19□□□□□ -1.58
CLIP1-205ENST00000514271 RBMY1EA6NEQ0 496 aaKnown RBP5.19□□□□□ -1.58
CLIP1-205ENST00000514271 NDUFC2O95298 119 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 RBMY1DP0C7P1 496 aaKnown RBP5.19□□□□□ -1.58
CLIP1-205ENST00000514271 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 CHCHD5Q9BSY4 110 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 JMJD1CQ15652 2540 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
CLIP1-205ENST00000514271 TRAV8-4A0A0B4J246 113 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 K7EIL1 84 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 RPL28P46779 137 aaKnown RBP5.19□□□□□ -1.58
CLIP1-205ENST00000514271 TMEM258P61165 79 aa5.19□□□□□ -1.58
CLIP1-205ENST00000514271 F6UB75 175 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 PFN2P35080 140 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 SETD2Q9BYW2 2564 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-205ENST00000514271 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 COX6A2Q02221 97 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 FBN1P35555 2871 aaKnown RBP5.18□□□□□ -1.58
CLIP1-205ENST00000514271 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
CLIP1-205ENST00000514271 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 CLEC2BQ92478 149 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 ATRQ13535 2644 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 IGHV3OR16-8A0A075B7F1 116 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 COX7CP15954 63 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 ODF3L2Q3SX64 289 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 TM2D3Q9BRN9 247 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 IGHV3-66A0A0C4DH42 116 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 IGHV4-30-4P0DP06 118 aa5.17□□□□□ -1.58
CLIP1-205ENST00000514271 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-205ENST00000514271 SRSF9Q13242 221 aaKnown RBP eCLIP5.17□□□□□ -1.58
CLIP1-205ENST00000514271 TRAV8-3A0A0A6YYJ7 113 aa5.16□□□□□ -1.58
CLIP1-205ENST00000514271 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
CLIP1-205ENST00000514271 PHLDA3Q9Y5J5 127 aa5.16□□□□□ -1.58
CLIP1-205ENST00000514271 RPL18AQ02543 176 aaKnown RBP5.16□□□□□ -1.58
CLIP1-205ENST00000514271 LINC00242Q5T6M2 205 aa5.16□□□□□ -1.58
CLIP1-205ENST00000514271 DEFB131AP59861 70 aa5.16□□□□□ -1.58
CLIP1-205ENST00000514271 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
CLIP1-205ENST00000514271 DAZ2Q13117 558 aaKnown RBP5.16□□□□□ -1.58
CLIP1-205ENST00000514271 DAZ4Q86SG3 579 aaKnown RBP5.16□□□□□ -1.58
CLIP1-205ENST00000514271 DAZ3Q9NR90 486 aaKnown RBP5.16□□□□□ -1.58
CLIP1-205ENST00000514271 SCGB1D4Q6XE38 83 aa5.15□□□□□ -1.58
CLIP1-205ENST00000514271 C11orf68Q9H3H3 251 aaKnown RBP5.15□□□□□ -1.58
CLIP1-205ENST00000514271 DYNC2H1Q8NCM8 4307 aaKnown RBP5.15□□□□□ -1.59
CLIP1-205ENST00000514271 IGHV1OR15-1A0A075B7D0 117 aa5.15□□□□□ -1.59
CLIP1-205ENST00000514271 LOC100131303A0A0U1RQF7 123 aa5.15□□□□□ -1.59
CLIP1-205ENST00000514271 Q6JHZ5 121 aa5.15□□□□□ -1.59
CLIP1-205ENST00000514271 COL6A5A8TX70 2615 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 IGHV3-53P01767 116 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 LGALS3P17931 250 aaKnown RBP5.14□□□□□ -1.59
CLIP1-205ENST00000514271 GAGE2AQ6NT46 116 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 SFTA2Q6UW10 78 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 PLAC8L1A1L4L8 177 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 MIFP14174 115 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 NTM-AS1Q6ZSK4 140 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 F5H697 171 aa5.14□□□□□ -1.59
CLIP1-205ENST00000514271 PAX4O43316 350 aa5.13□□□□□ -1.59
CLIP1-205ENST00000514271 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
CLIP1-205ENST00000514271 IGHV3-49A0A0A0MS15 119 aa5.13□□□□□ -1.59
CLIP1-205ENST00000514271 INSP01308 110 aa5.13□□□□□ -1.59
CLIP1-205ENST00000514271 NDUFA12Q9UI09 145 aa5.13□□□□□ -1.59
CLIP1-205ENST00000514271 LINC00337Q8N6G1 96 aa5.12□□□□□ -1.59
CLIP1-205ENST00000514271 LYRM9A8MSI8 78 aa5.12□□□□□ -1.59
CLIP1-205ENST00000514271 BCE1O60756 84 aa5.12□□□□□ -1.59
CLIP1-205ENST00000514271 CDKN2A-AS1Q9UH64 79 aa5.12□□□□□ -1.59
CLIP1-205ENST00000514271 IGHV3OR16-13A0A075B7E8 117 aa5.11□□□□□ -1.59
CLIP1-205ENST00000514271 IGHV3-74A0A0B4J1X5 117 aa5.11□□□□□ -1.59
CLIP1-205ENST00000514271 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
CLIP1-205ENST00000514271 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
CLIP1-205ENST00000514271 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
CLIP1-205ENST00000514271 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 MGPP08493 103 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 Q6ZRU5 148 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 WWC2-AS2Q96NR7 200 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 CDC42SE2Q9NRR3 84 aa5.1□□□□□ -1.59
CLIP1-205ENST00000514271 C3orf84H3BNL1 204 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 C16orf74Q96GX8 76 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 DNAH7Q8WXX0 4024 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 IGKV2-29A2NJV5 120 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-205ENST00000514271 GIG44P09565 113 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-205ENST00000514271 ZNF56Q15929 161 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 STAB1Q9NY15 2570 aa5.09□□□□□ -1.59
CLIP1-205ENST00000514271 OVOL2Q9BRP0 275 aa5.09□□□□□ -1.6
CLIP1-205ENST00000514271 CELA1Q9UNI1 258 aa5.09□□□□□ -1.6
CLIP1-205ENST00000514271 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.6
CLIP1-205ENST00000514271 IGKV3-7A0A075B6H7 116 aa5.08□□□□□ -1.6
CLIP1-205ENST00000514271 CSNK1G2-AS1Q8NCQ2 148 aa5.08□□□□□ -1.6
CLIP1-205ENST00000514271 A0A087WYN8 130 aa5.08□□□□□ -1.6
CLIP1-205ENST00000514271 TRAV12-3A0A0B4J271 114 aa5.08□□□□□ -1.6
CLIP1-205ENST00000514271 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
CLIP1-205ENST00000514271 LINC00846Q9NV44 126 aa5.07□□□□□ -1.6
CLIP1-205ENST00000514271 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
CLIP1-205ENST00000514271 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
CLIP1-205ENST00000514271 SORL1Q92673 2214 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 TENM1Q9UKZ4 2725 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms