RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
SMAD1-212ENST00000514168 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
SMAD1-212ENST00000514168 HERVK_113P61574 105 aa7.74□□□□□ -1.17
SMAD1-212ENST00000514168 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-212ENST00000514168 Q8IZM0 81 aa7.74□□□□□ -1.17
SMAD1-212ENST00000514168 NTN5Q8WTR8 489 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-212ENST00000514168 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
SMAD1-212ENST00000514168 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-212ENST00000514168 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-212ENST00000514168 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 F8WDY8 70 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 KIAA0087Q14695 138 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 COX7B2Q8TF08 81 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
SMAD1-212ENST00000514168 SCGB1D1O95968 90 aa7.72□□□□□ -1.17
SMAD1-212ENST00000514168 XGP55808 180 aa7.72□□□□□ -1.17
SMAD1-212ENST00000514168 CKS1BP61024 79 aa7.72□□□□□ -1.17
SMAD1-212ENST00000514168 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
SMAD1-212ENST00000514168 SYCNQ0VAF6 134 aa7.72□□□□□ -1.17
SMAD1-212ENST00000514168 CAMK2N2Q96S95 79 aa7.72□□□□□ -1.17
SMAD1-212ENST00000514168 IGLV5-52A0A0A0MRZ9 124 aa7.71□□□□□ -1.18
SMAD1-212ENST00000514168 NDUFA1O15239 70 aa7.71□□□□□ -1.18
SMAD1-212ENST00000514168 CXCL5P42830 114 aa7.71□□□□□ -1.18
SMAD1-212ENST00000514168 CDPF1Q6NVV7 123 aa7.71□□□□□ -1.18
SMAD1-212ENST00000514168 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
SMAD1-212ENST00000514168 EPM2AB3EWF7 344 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 LEPROTO15243 131 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 SLPIP03973 132 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 STPG4Q8N801 248 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
SMAD1-212ENST00000514168 PCP4L1A6NKN8 68 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 E9PLD3 99 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMAD1-212ENST00000514168 C2orf82Q6UX34 121 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 Q6ZRU5 148 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
SMAD1-212ENST00000514168 RNF151Q2KHN1 245 aa7.68□□□□□ -1.18
SMAD1-212ENST00000514168 SFTA2Q6UW10 78 aa7.68□□□□□ -1.18
SMAD1-212ENST00000514168 TRBV30A0A0K0K1B3 111 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 TSTD3H0UI37 97 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 J3QQQ9 107 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 INAFM2P0DMQ5 153 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
SMAD1-212ENST00000514168 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SMAD1-212ENST00000514168 SRRM2Q9UQ35 2752 aaKnown RBP7.66□□□□□ -1.18
SMAD1-212ENST00000514168 GCSHP23434 173 aa7.66□□□□□ -1.18
SMAD1-212ENST00000514168 CTAG1AP78358 180 aa7.66□□□□□ -1.18
SMAD1-212ENST00000514168 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
SMAD1-212ENST00000514168 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
SMAD1-212ENST00000514168 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 NMUP48645 174 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 TSPEAR-AS2P59090 65 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 KRTAP10-1P60331 282 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 Q5VSD8 79 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
SMAD1-212ENST00000514168 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
SMAD1-212ENST00000514168 IGKV2D-26A0A0A0MRZ7 120 aa7.64□□□□□ -1.19
SMAD1-212ENST00000514168 HERV-K104P63124 156 aa7.64□□□□□ -1.19
SMAD1-212ENST00000514168 MAJINQ3KP22 176 aa7.64□□□□□ -1.19
SMAD1-212ENST00000514168 LINC01620Q4KN68 170 aa7.64□□□□□ -1.19
SMAD1-212ENST00000514168 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
SMAD1-212ENST00000514168 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
SMAD1-212ENST00000514168 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
SMAD1-212ENST00000514168 LINC00587B1AMM8 73 aa7.62□□□□□ -1.19
SMAD1-212ENST00000514168 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
SMAD1-212ENST00000514168 C9orf116Q5BN46 136 aaPredicted RBP7.62□□□□□ -1.19
SMAD1-212ENST00000514168 VAMP8Q9BV40 100 aa7.62□□□□□ -1.19
SMAD1-212ENST00000514168 ERG28Q9UKR5 140 aa7.62□□□□□ -1.19
SMAD1-212ENST00000514168 NDUFC2-KCTD14E9PQ53 114 aa7.61□□□□□ -1.19
SMAD1-212ENST00000514168 COX17Q14061 63 aa7.61□□□□□ -1.19
SMAD1-212ENST00000514168 LBHQ53QV2 105 aaPredicted RBP7.61□□□□□ -1.19
SMAD1-212ENST00000514168 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 DDTP30046 118 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 PFN2P35080 140 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
SMAD1-212ENST00000514168 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 MEIG1Q5JSS6 88 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 PAM16Q9Y3D7 125 aa7.6□□□□□ -1.19
SMAD1-212ENST00000514168 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
SMAD1-212ENST00000514168 Q6ZRP5 223 aa7.59□□□□□ -1.19
SMAD1-212ENST00000514168 A0A096LNI7 61 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 A0A0J9YXY3 114 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 SMR3BP02814 79 aaPredicted RBP7.58□□□□□ -1.2
SMAD1-212ENST00000514168 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 LINC00158P58513 81 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
SMAD1-212ENST00000514168 GAGE2EQ4V326 116 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 GAGE2DQ9UEU5 116 aa7.58□□□□□ -1.2
SMAD1-212ENST00000514168 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
SMAD1-212ENST00000514168 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms