RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 ZNF407Q9C0G0 2248 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 TRGV1A0A0A0MS02 117 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 LOC100131303A0A0U1RQF7 123 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 G3V318 75 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 C11orf71Q6IPW1 123 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 UNQ9165/PRO28630Q6UXU0 137 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 C11orf72Q8NBR9 251 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 WFDC11Q8NEX6 87 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 C4orf3Q8WVX3 66 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 Q9BRP9 147 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 C16orf95Q9H693 158 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 TP53AIP1Q9HCN2 124 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 PTPRBP23467 1997 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 TNCP24821 2201 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 A0A0C4DFX4 3053 aa2.21□□□□□ -2.06
PROM1-216ENST00000513946 PDE4DIPQ5VU43 2346 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 KNTC1P50748 2209 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 IGHV3OR16-13A0A075B7E8 117 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 A0A087WVE0 104 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 IGHV3-49A0A0A0MS15 119 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 IGHV3-74A0A0B4J1X5 117 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 LCE6AA0A183 80 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 LINC00959A0A1B0GUT2 108 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 M0R378 163 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 IGLV6-57P01721 117 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 HTN1P15515 57 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 DEFB131AP59861 70 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 C6orf99Q4VX62 202 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
PROM1-216ENST00000513946 FAM19A1Q7Z5A9 133 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 TM2D3Q9BRN9 247 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 OCR1Q9BZK8 76 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 PRO0255Q9UI72 69 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 CACNA1EQ15878 2313 aa2.2□□□□□ -2.06
PROM1-216ENST00000513946 TET2Q6N021 2002 aaPredicted RBP2.2□□□□□ -2.06
PROM1-216ENST00000513946 IGKV3-7A0A075B6H7 116 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 ZNF73O43830 326 aaPredicted RBP2.19□□□□□ -2.06
PROM1-216ENST00000513946 MSMBP08118 114 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 COX6A2Q02221 97 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 EGFEM1PQ0D2K5 195 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 SOSTDC1Q6X4U4 206 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 NKAPP1Q8N9T2 125 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 B9D2Q9BPU9 175 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 CEP350Q5VT06 3117 aa2.19□□□□□ -2.06
PROM1-216ENST00000513946 CABIN1Q9Y6J0 2220 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 CNTRLQ7Z7A1 2325 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 SDK2Q58EX2 2172 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 ARFGEF3Q5TH69 2177 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 IGLV5-48A0A075B6I7 105 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 CHKB-CPT1BH3BT56 60 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 PRM2P04554 102 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 CASC2Q6XLA1 102 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 Q6ZQY7 126 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 LCA10Q71F78 164 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 LINC00269Q8N2A0 174 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 TMEM105Q8N8V8 129 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 WFDC9Q8NEX5 89 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 RMI2Q96E14 147 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 LINC00208Q96KT6 92 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
PROM1-216ENST00000513946 IGHV3-73A0A0B4J1V6 119 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 LOC101927531A0A1B0GV80 90 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 A6NED7 52 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 H3BNG1 76 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 C1orf64Q8NEQ6 169 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 FAM104AQ969W3 186 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 KCNQ1DNQ9H478 68 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 RETNQ9HD89 108 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 PCNTO95613 3336 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 ASXL3Q9C0F0 2248 aa2.17□□□□□ -2.06
PROM1-216ENST00000513946 MED12Q93074 2177 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 KNL1Q8NG31 2342 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 DIDO1Q9BTC0 2240 aaKnown RBP2.16□□□□□ -2.06
PROM1-216ENST00000513946 TRAV22A0A0B4J277 110 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 PSCAO43653 123 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 OXTP01178 125 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 PRB2P02812 416 aaPredicted RBP2.16□□□□□ -2.06
PROM1-216ENST00000513946 APOC4P55056 127 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 KRTAP10-1P60331 282 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 RPL37AP61513 92 aaKnown RBP2.16□□□□□ -2.06
PROM1-216ENST00000513946 RNASE13Q5GAN3 156 aaKnown RBP2.16□□□□□ -2.06
PROM1-216ENST00000513946 KPRPQ5T749 579 aaPredicted RBP2.16□□□□□ -2.06
PROM1-216ENST00000513946 Q6ZTI0 123 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 SPRR4Q96PI1 79 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 WFDC10AQ9H1F0 79 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 ANAPC11Q9NYG5 84 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 FREM1Q5H8C1 2179 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 DSCAML1Q8TD84 2053 aa2.16□□□□□ -2.06
PROM1-216ENST00000513946 DSCAMO60469 2012 aa2.15□□□□□ -2.06
PROM1-216ENST00000513946 DNAH12Q6ZR08 3092 aa2.15□□□□□ -2.06
PROM1-216ENST00000513946 TRAV10A0A0B4J240 114 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms