RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CEND1Q8N111 149 aa6.69□□□□□ -1.34
TPM3-221ENST00000513769 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
TPM3-221ENST00000513769 CHCHD10Q8WYQ3 142 aaPredicted RBP6.69□□□□□ -1.34
TPM3-221ENST00000513769 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
TPM3-221ENST00000513769 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 TMEM238C9JI98 176 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 F8WDY8 70 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 COX7A2LO14548 114 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 CRPP02741 224 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 IFITM1P13164 125 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 CXCL5P42830 114 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 Q8IZM0 81 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 TTTY13Q9BZ97 58 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 APLNQ9ULZ1 77 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 COX11Q9Y6N1 276 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
TPM3-221ENST00000513769 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 XCL1P47992 114 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 HINT1P49773 126 aaPredicted RBP6.67□□□□□ -1.34
TPM3-221ENST00000513769 WFDC10BQ8IUB3 73 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 Q9H8V8 135 aa6.67□□□□□ -1.34
TPM3-221ENST00000513769 IGHV3-30P01768 117 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 IGHV3-33P01772 117 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 PRSS2P07478 247 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 IGHV3-30-5P0DP03 117 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 MALP21145 153 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 FOXI1Q12951 378 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 COX17Q14061 63 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 C5orf38Q86SI9 138 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 MUC7Q8TAX7 377 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 RMI2Q96E14 147 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 ZNF625Q96I27 306 aaPredicted RBP6.66□□□□□ -1.34
TPM3-221ENST00000513769 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
TPM3-221ENST00000513769 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
TPM3-221ENST00000513769 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
TPM3-221ENST00000513769 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
TPM3-221ENST00000513769 RYR3Q15413 4870 aa6.64□□□□□ -1.35
TPM3-221ENST00000513769 C1orf43Q9BWL3 253 aa6.64□□□□□ -1.35
TPM3-221ENST00000513769 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 CKS1BP61024 79 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
TPM3-221ENST00000513769 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
TPM3-221ENST00000513769 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
TPM3-221ENST00000513769 BATFQ16520 125 aa6.62□□□□□ -1.35
TPM3-221ENST00000513769 LITAFQ99732 161 aa6.62□□□□□ -1.35
TPM3-221ENST00000513769 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
TPM3-221ENST00000513769 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
TPM3-221ENST00000513769 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
TPM3-221ENST00000513769 C2orf48Q96LS8 159 aa6.61□□□□□ -1.35
TPM3-221ENST00000513769 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
TPM3-221ENST00000513769 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
TPM3-221ENST00000513769 LOC107984156A0A0G2JMH3 177 aa6.6□□□□□ -1.35
TPM3-221ENST00000513769 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
TPM3-221ENST00000513769 ARL17AQ8IVW1 177 aa6.6□□□□□ -1.35
TPM3-221ENST00000513769 NTN5Q8WTR8 489 aaPredicted RBP6.6□□□□□ -1.35
TPM3-221ENST00000513769 ZNF561-AS1K7EIQ3 104 aa6.59□□□□□ -1.35
TPM3-221ENST00000513769 FXYD2P54710 66 aa6.59□□□□□ -1.35
TPM3-221ENST00000513769 CASC10Q5T4H9 136 aa6.59□□□□□ -1.35
TPM3-221ENST00000513769 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
TPM3-221ENST00000513769 IGKV2D-24A0A075B6R9 120 aa6.58□□□□□ -1.36
TPM3-221ENST00000513769 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
TPM3-221ENST00000513769 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
TPM3-221ENST00000513769 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
TPM3-221ENST00000513769 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 LINC00158P58513 81 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 NHP2Q9NX24 153 aaKnown RBP6.57□□□□□ -1.36
TPM3-221ENST00000513769 PRO1854Q9UHT4 67 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
TPM3-221ENST00000513769 TENM2Q9NT68 2774 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 A4D1N5 150 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 CFC1BP0CG36 223 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 CFC1P0CG37 223 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 SPAG11BQ08648 103 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
TPM3-221ENST00000513769 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
TPM3-221ENST00000513769 LCE6AA0A183 80 aa6.54□□□□□ -1.36
TPM3-221ENST00000513769 NDUFC2O95298 119 aa6.54□□□□□ -1.36
TPM3-221ENST00000513769 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
TPM3-221ENST00000513769 RAB37Q96AX2 223 aa6.54□□□□□ -1.36
TPM3-221ENST00000513769 DNAH9Q9NYC9 4486 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 NBDYA0A0U1RRE5 68 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 C14orf177Q52M58 125 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
TPM3-221ENST00000513769 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
TPM3-221ENST00000513769 PFN2P35080 140 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms